Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1865 | 5818;5819;5820 | chr2:178776271;178776270;178776269 | chr2:179640998;179640997;179640996 |
N2AB | 1865 | 5818;5819;5820 | chr2:178776271;178776270;178776269 | chr2:179640998;179640997;179640996 |
N2A | 1865 | 5818;5819;5820 | chr2:178776271;178776270;178776269 | chr2:179640998;179640997;179640996 |
N2B | 1819 | 5680;5681;5682 | chr2:178776271;178776270;178776269 | chr2:179640998;179640997;179640996 |
Novex-1 | 1819 | 5680;5681;5682 | chr2:178776271;178776270;178776269 | chr2:179640998;179640997;179640996 |
Novex-2 | 1819 | 5680;5681;5682 | chr2:178776271;178776270;178776269 | chr2:179640998;179640997;179640996 |
Novex-3 | 1865 | 5818;5819;5820 | chr2:178776271;178776270;178776269 | chr2:179640998;179640997;179640996 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs2092214772 | None | 0.999 | N | 0.445 | 0.444 | 0.378674557249 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.06782E-04 | 0 |
T/A | rs2092214772 | None | 0.999 | N | 0.445 | 0.444 | 0.378674557249 | gnomAD-4.0.0 | 2.02979E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.20491E-06 | 4.69572E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1725 | likely_benign | 0.2049 | benign | -0.641 | Destabilizing | 0.999 | D | 0.445 | neutral | N | 0.508647459 | None | None | I |
T/C | 0.7678 | likely_pathogenic | 0.8049 | pathogenic | -0.386 | Destabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | I |
T/D | 0.7984 | likely_pathogenic | 0.8614 | pathogenic | 0.063 | Stabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | I |
T/E | 0.6605 | likely_pathogenic | 0.7504 | pathogenic | 0.045 | Stabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | I |
T/F | 0.5515 | ambiguous | 0.6186 | pathogenic | -0.773 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | I |
T/G | 0.5229 | ambiguous | 0.6017 | pathogenic | -0.873 | Destabilizing | 1.0 | D | 0.639 | neutral | None | None | None | None | I |
T/H | 0.5827 | likely_pathogenic | 0.6735 | pathogenic | -1.112 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | I |
T/I | 0.2957 | likely_benign | 0.3423 | ambiguous | -0.124 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | N | 0.511268854 | None | None | I |
T/K | 0.5517 | ambiguous | 0.6442 | pathogenic | -0.631 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | N | 0.511156116 | None | None | I |
T/L | 0.1951 | likely_benign | 0.2284 | benign | -0.124 | Destabilizing | 0.999 | D | 0.605 | neutral | None | None | None | None | I |
T/M | 0.1419 | likely_benign | 0.1543 | benign | 0.02 | Stabilizing | 1.0 | D | 0.668 | neutral | None | None | None | None | I |
T/N | 0.2799 | likely_benign | 0.3396 | benign | -0.479 | Destabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | I |
T/P | 0.7669 | likely_pathogenic | 0.7908 | pathogenic | -0.264 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | D | 0.605136791 | None | None | I |
T/Q | 0.4774 | ambiguous | 0.576 | pathogenic | -0.628 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | I |
T/R | 0.4919 | ambiguous | 0.5768 | pathogenic | -0.392 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | N | 0.512751637 | None | None | I |
T/S | 0.2002 | likely_benign | 0.2403 | benign | -0.749 | Destabilizing | 0.999 | D | 0.44 | neutral | N | 0.487479234 | None | None | I |
T/V | 0.2237 | likely_benign | 0.2536 | benign | -0.264 | Destabilizing | 0.999 | D | 0.529 | neutral | None | None | None | None | I |
T/W | 0.8835 | likely_pathogenic | 0.9115 | pathogenic | -0.736 | Destabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | I |
T/Y | 0.7004 | likely_pathogenic | 0.7534 | pathogenic | -0.499 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.