Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18651 | 56176;56177;56178 | chr2:178600953;178600952;178600951 | chr2:179465680;179465679;179465678 |
N2AB | 17010 | 51253;51254;51255 | chr2:178600953;178600952;178600951 | chr2:179465680;179465679;179465678 |
N2A | 16083 | 48472;48473;48474 | chr2:178600953;178600952;178600951 | chr2:179465680;179465679;179465678 |
N2B | 9586 | 28981;28982;28983 | chr2:178600953;178600952;178600951 | chr2:179465680;179465679;179465678 |
Novex-1 | 9711 | 29356;29357;29358 | chr2:178600953;178600952;178600951 | chr2:179465680;179465679;179465678 |
Novex-2 | 9778 | 29557;29558;29559 | chr2:178600953;178600952;178600951 | chr2:179465680;179465679;179465678 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs876658067 | -1.164 | 0.014 | N | 0.279 | 0.268 | 0.331365685468 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
E/G | rs876658067 | -1.164 | 0.014 | N | 0.279 | 0.268 | 0.331365685468 | gnomAD-4.0.0 | 8.214E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.19837E-06 | 0 | 6.62888E-05 |
E/K | None | None | 0.822 | N | 0.574 | 0.304 | 0.370240404367 | gnomAD-4.0.0 | 1.59289E-06 | None | None | None | None | N | None | 5.66829E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1428 | likely_benign | 0.1338 | benign | -0.533 | Destabilizing | 0.698 | D | 0.432 | neutral | N | 0.465479755 | None | None | N |
E/C | 0.8676 | likely_pathogenic | 0.8372 | pathogenic | -0.198 | Destabilizing | 0.998 | D | 0.683 | prob.neutral | None | None | None | None | N |
E/D | 0.293 | likely_benign | 0.2512 | benign | -0.53 | Destabilizing | 0.822 | D | 0.49 | neutral | N | 0.480549497 | None | None | N |
E/F | 0.8712 | likely_pathogenic | 0.8239 | pathogenic | -0.312 | Destabilizing | 0.998 | D | 0.646 | neutral | None | None | None | None | N |
E/G | 0.2812 | likely_benign | 0.2439 | benign | -0.764 | Destabilizing | 0.014 | N | 0.279 | neutral | N | 0.490678035 | None | None | N |
E/H | 0.6654 | likely_pathogenic | 0.6201 | pathogenic | -0.166 | Destabilizing | 0.998 | D | 0.576 | neutral | None | None | None | None | N |
E/I | 0.4555 | ambiguous | 0.3995 | ambiguous | 0.053 | Stabilizing | 0.978 | D | 0.659 | neutral | None | None | None | None | N |
E/K | 0.2692 | likely_benign | 0.2578 | benign | 0.085 | Stabilizing | 0.822 | D | 0.574 | neutral | N | 0.472293837 | None | None | N |
E/L | 0.5611 | ambiguous | 0.4774 | ambiguous | 0.053 | Stabilizing | 0.978 | D | 0.635 | neutral | None | None | None | None | N |
E/M | 0.5647 | likely_pathogenic | 0.503 | ambiguous | 0.178 | Stabilizing | 0.998 | D | 0.599 | neutral | None | None | None | None | N |
E/N | 0.4167 | ambiguous | 0.3699 | ambiguous | -0.28 | Destabilizing | 0.956 | D | 0.604 | neutral | None | None | None | None | N |
E/P | 0.3634 | ambiguous | 0.3525 | ambiguous | -0.122 | Destabilizing | 0.993 | D | 0.543 | neutral | None | None | None | None | N |
E/Q | 0.1799 | likely_benign | 0.1647 | benign | -0.237 | Destabilizing | 0.99 | D | 0.654 | neutral | N | 0.513459771 | None | None | N |
E/R | 0.4065 | ambiguous | 0.3966 | ambiguous | 0.343 | Stabilizing | 0.978 | D | 0.607 | neutral | None | None | None | None | N |
E/S | 0.2425 | likely_benign | 0.2124 | benign | -0.456 | Destabilizing | 0.86 | D | 0.55 | neutral | None | None | None | None | N |
E/T | 0.2994 | likely_benign | 0.248 | benign | -0.271 | Destabilizing | 0.978 | D | 0.517 | neutral | None | None | None | None | N |
E/V | 0.2733 | likely_benign | 0.2389 | benign | -0.122 | Destabilizing | 0.971 | D | 0.594 | neutral | N | 0.475447389 | None | None | N |
E/W | 0.9622 | likely_pathogenic | 0.9421 | pathogenic | -0.122 | Destabilizing | 0.998 | D | 0.683 | prob.neutral | None | None | None | None | N |
E/Y | 0.8092 | likely_pathogenic | 0.7575 | pathogenic | -0.068 | Destabilizing | 0.993 | D | 0.608 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.