Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18659 | 56200;56201;56202 | chr2:178600929;178600928;178600927 | chr2:179465656;179465655;179465654 |
N2AB | 17018 | 51277;51278;51279 | chr2:178600929;178600928;178600927 | chr2:179465656;179465655;179465654 |
N2A | 16091 | 48496;48497;48498 | chr2:178600929;178600928;178600927 | chr2:179465656;179465655;179465654 |
N2B | 9594 | 29005;29006;29007 | chr2:178600929;178600928;178600927 | chr2:179465656;179465655;179465654 |
Novex-1 | 9719 | 29380;29381;29382 | chr2:178600929;178600928;178600927 | chr2:179465656;179465655;179465654 |
Novex-2 | 9786 | 29581;29582;29583 | chr2:178600929;178600928;178600927 | chr2:179465656;179465655;179465654 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.767 | N | 0.331 | 0.301 | 0.549460442827 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8022 | likely_pathogenic | 0.8111 | pathogenic | -2.486 | Highly Destabilizing | 0.998 | D | 0.668 | neutral | D | 0.550010679 | None | None | N |
V/C | 0.9469 | likely_pathogenic | 0.9465 | pathogenic | -1.993 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
V/D | 0.9984 | likely_pathogenic | 0.9988 | pathogenic | -3.585 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | D | 0.629947995 | None | None | N |
V/E | 0.9944 | likely_pathogenic | 0.9956 | pathogenic | -3.292 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
V/F | 0.9696 | likely_pathogenic | 0.9633 | pathogenic | -1.452 | Destabilizing | 0.999 | D | 0.852 | deleterious | D | 0.56795035 | None | None | N |
V/G | 0.8985 | likely_pathogenic | 0.9228 | pathogenic | -3.056 | Highly Destabilizing | 1.0 | D | 0.894 | deleterious | D | 0.629947995 | None | None | N |
V/H | 0.9992 | likely_pathogenic | 0.9991 | pathogenic | -2.948 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
V/I | 0.1725 | likely_benign | 0.1333 | benign | -0.828 | Destabilizing | 0.767 | D | 0.331 | neutral | N | 0.510494903 | None | None | N |
V/K | 0.9972 | likely_pathogenic | 0.9976 | pathogenic | -2.157 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
V/L | 0.8447 | likely_pathogenic | 0.7965 | pathogenic | -0.828 | Destabilizing | 0.981 | D | 0.627 | neutral | N | 0.504973397 | None | None | N |
V/M | 0.9053 | likely_pathogenic | 0.8727 | pathogenic | -1.035 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
V/N | 0.9938 | likely_pathogenic | 0.9945 | pathogenic | -2.776 | Highly Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
V/P | 0.9954 | likely_pathogenic | 0.9968 | pathogenic | -1.363 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
V/Q | 0.9946 | likely_pathogenic | 0.9949 | pathogenic | -2.473 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
V/R | 0.9925 | likely_pathogenic | 0.9939 | pathogenic | -2.102 | Highly Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
V/S | 0.9605 | likely_pathogenic | 0.9645 | pathogenic | -3.264 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
V/T | 0.9222 | likely_pathogenic | 0.9266 | pathogenic | -2.829 | Highly Destabilizing | 0.998 | D | 0.743 | deleterious | None | None | None | None | N |
V/W | 0.9995 | likely_pathogenic | 0.9994 | pathogenic | -2.093 | Highly Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
V/Y | 0.9969 | likely_pathogenic | 0.9966 | pathogenic | -1.773 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.