Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18665 | 56218;56219;56220 | chr2:178600911;178600910;178600909 | chr2:179465638;179465637;179465636 |
N2AB | 17024 | 51295;51296;51297 | chr2:178600911;178600910;178600909 | chr2:179465638;179465637;179465636 |
N2A | 16097 | 48514;48515;48516 | chr2:178600911;178600910;178600909 | chr2:179465638;179465637;179465636 |
N2B | 9600 | 29023;29024;29025 | chr2:178600911;178600910;178600909 | chr2:179465638;179465637;179465636 |
Novex-1 | 9725 | 29398;29399;29400 | chr2:178600911;178600910;178600909 | chr2:179465638;179465637;179465636 |
Novex-2 | 9792 | 29599;29600;29601 | chr2:178600911;178600910;178600909 | chr2:179465638;179465637;179465636 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 1.0 | N | 0.704 | 0.397 | 0.427596317008 | gnomAD-4.0.0 | 6.84532E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99831E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6509 | likely_pathogenic | 0.6284 | pathogenic | -0.82 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | I |
A/D | 0.9401 | likely_pathogenic | 0.9264 | pathogenic | -0.495 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | I |
A/E | 0.8521 | likely_pathogenic | 0.8135 | pathogenic | -0.652 | Destabilizing | 1.0 | D | 0.797 | deleterious | N | 0.519865668 | None | None | I |
A/F | 0.6833 | likely_pathogenic | 0.6163 | pathogenic | -0.883 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | I |
A/G | 0.3669 | ambiguous | 0.4086 | ambiguous | -0.212 | Destabilizing | 1.0 | D | 0.607 | neutral | N | 0.476457666 | None | None | I |
A/H | 0.8708 | likely_pathogenic | 0.8415 | pathogenic | -0.165 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | I |
A/I | 0.5568 | ambiguous | 0.443 | ambiguous | -0.377 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
A/K | 0.9134 | likely_pathogenic | 0.9123 | pathogenic | -0.511 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | I |
A/L | 0.5574 | ambiguous | 0.51 | ambiguous | -0.377 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | I |
A/M | 0.5572 | ambiguous | 0.4821 | ambiguous | -0.493 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | I |
A/N | 0.8038 | likely_pathogenic | 0.7464 | pathogenic | -0.229 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | I |
A/P | 0.9434 | likely_pathogenic | 0.955 | pathogenic | -0.292 | Destabilizing | 1.0 | D | 0.811 | deleterious | N | 0.513733041 | None | None | I |
A/Q | 0.7685 | likely_pathogenic | 0.7434 | pathogenic | -0.512 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
A/R | 0.8182 | likely_pathogenic | 0.8311 | pathogenic | -0.045 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
A/S | 0.2135 | likely_benign | 0.1892 | benign | -0.417 | Destabilizing | 1.0 | D | 0.607 | neutral | N | 0.512729052 | None | None | I |
A/T | 0.3298 | likely_benign | 0.3054 | benign | -0.5 | Destabilizing | 1.0 | D | 0.768 | deleterious | N | 0.473383474 | None | None | I |
A/V | 0.2423 | likely_benign | 0.1794 | benign | -0.292 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | N | 0.44202096 | None | None | I |
A/W | 0.9525 | likely_pathogenic | 0.9516 | pathogenic | -0.98 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | I |
A/Y | 0.8625 | likely_pathogenic | 0.8393 | pathogenic | -0.654 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.