Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18668 | 56227;56228;56229 | chr2:178600902;178600901;178600900 | chr2:179465629;179465628;179465627 |
N2AB | 17027 | 51304;51305;51306 | chr2:178600902;178600901;178600900 | chr2:179465629;179465628;179465627 |
N2A | 16100 | 48523;48524;48525 | chr2:178600902;178600901;178600900 | chr2:179465629;179465628;179465627 |
N2B | 9603 | 29032;29033;29034 | chr2:178600902;178600901;178600900 | chr2:179465629;179465628;179465627 |
Novex-1 | 9728 | 29407;29408;29409 | chr2:178600902;178600901;178600900 | chr2:179465629;179465628;179465627 |
Novex-2 | 9795 | 29608;29609;29610 | chr2:178600902;178600901;178600900 | chr2:179465629;179465628;179465627 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | None | None | 1.0 | N | 0.87 | 0.53 | 0.389126455913 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.6174 | likely_pathogenic | 0.6687 | pathogenic | -0.753 | Destabilizing | 0.998 | D | 0.721 | prob.delet. | None | None | None | None | N |
S/C | 0.8147 | likely_pathogenic | 0.8564 | pathogenic | -0.708 | Destabilizing | 1.0 | D | 0.857 | deleterious | D | 0.536610236 | None | None | N |
S/D | 0.9935 | likely_pathogenic | 0.9962 | pathogenic | -1.496 | Destabilizing | 0.999 | D | 0.786 | deleterious | None | None | None | None | N |
S/E | 0.9953 | likely_pathogenic | 0.9973 | pathogenic | -1.366 | Destabilizing | 0.999 | D | 0.748 | deleterious | None | None | None | None | N |
S/F | 0.996 | likely_pathogenic | 0.9978 | pathogenic | -0.461 | Destabilizing | 1.0 | D | 0.914 | deleterious | None | None | None | None | N |
S/G | 0.3181 | likely_benign | 0.2713 | benign | -1.105 | Destabilizing | 0.999 | D | 0.741 | deleterious | N | 0.456304474 | None | None | N |
S/H | 0.9931 | likely_pathogenic | 0.9955 | pathogenic | -1.516 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
S/I | 0.9941 | likely_pathogenic | 0.9963 | pathogenic | 0.119 | Stabilizing | 1.0 | D | 0.917 | deleterious | D | 0.536356746 | None | None | N |
S/K | 0.9991 | likely_pathogenic | 0.9995 | pathogenic | -0.883 | Destabilizing | 0.999 | D | 0.772 | deleterious | None | None | None | None | N |
S/L | 0.9731 | likely_pathogenic | 0.9808 | pathogenic | 0.119 | Stabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
S/M | 0.9873 | likely_pathogenic | 0.9901 | pathogenic | 0.085 | Stabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
S/N | 0.9781 | likely_pathogenic | 0.9855 | pathogenic | -1.299 | Destabilizing | 0.999 | D | 0.739 | prob.delet. | D | 0.535596278 | None | None | N |
S/P | 0.9924 | likely_pathogenic | 0.9947 | pathogenic | -0.137 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
S/Q | 0.9938 | likely_pathogenic | 0.9957 | pathogenic | -1.162 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
S/R | 0.9976 | likely_pathogenic | 0.9986 | pathogenic | -1.041 | Destabilizing | 1.0 | D | 0.87 | deleterious | N | 0.517745512 | None | None | N |
S/T | 0.8479 | likely_pathogenic | 0.8608 | pathogenic | -1.009 | Destabilizing | 0.999 | D | 0.732 | prob.delet. | D | 0.523226014 | None | None | N |
S/V | 0.9906 | likely_pathogenic | 0.9936 | pathogenic | -0.137 | Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
S/W | 0.9931 | likely_pathogenic | 0.9965 | pathogenic | -0.714 | Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
S/Y | 0.9927 | likely_pathogenic | 0.9963 | pathogenic | -0.342 | Destabilizing | 1.0 | D | 0.916 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.