Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18669 | 56230;56231;56232 | chr2:178600899;178600898;178600897 | chr2:179465626;179465625;179465624 |
N2AB | 17028 | 51307;51308;51309 | chr2:178600899;178600898;178600897 | chr2:179465626;179465625;179465624 |
N2A | 16101 | 48526;48527;48528 | chr2:178600899;178600898;178600897 | chr2:179465626;179465625;179465624 |
N2B | 9604 | 29035;29036;29037 | chr2:178600899;178600898;178600897 | chr2:179465626;179465625;179465624 |
Novex-1 | 9729 | 29410;29411;29412 | chr2:178600899;178600898;178600897 | chr2:179465626;179465625;179465624 |
Novex-2 | 9796 | 29611;29612;29613 | chr2:178600899;178600898;178600897 | chr2:179465626;179465625;179465624 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs749362468 | 0.2 | 0.334 | N | 0.534 | 0.17 | 0.201204373187 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
K/E | rs749362468 | 0.2 | 0.334 | N | 0.534 | 0.17 | 0.201204373187 | gnomAD-4.0.0 | 1.36911E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.31986E-05 | 0 |
K/N | None | None | 0.549 | N | 0.565 | 0.133 | 0.0954503805726 | gnomAD-4.0.0 | 1.59328E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.41896E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4991 | ambiguous | 0.4278 | ambiguous | -0.025 | Destabilizing | 0.4 | N | 0.501 | neutral | None | None | None | None | I |
K/C | 0.8415 | likely_pathogenic | 0.7412 | pathogenic | -0.228 | Destabilizing | 0.992 | D | 0.603 | neutral | None | None | None | None | I |
K/D | 0.7422 | likely_pathogenic | 0.7075 | pathogenic | -0.047 | Destabilizing | 0.617 | D | 0.592 | neutral | None | None | None | None | I |
K/E | 0.3494 | ambiguous | 0.3273 | benign | -0.022 | Destabilizing | 0.334 | N | 0.534 | neutral | N | 0.389455912 | None | None | I |
K/F | 0.8565 | likely_pathogenic | 0.8053 | pathogenic | -0.136 | Destabilizing | 0.972 | D | 0.579 | neutral | None | None | None | None | I |
K/G | 0.6445 | likely_pathogenic | 0.5387 | ambiguous | -0.248 | Destabilizing | 0.617 | D | 0.573 | neutral | None | None | None | None | I |
K/H | 0.4679 | ambiguous | 0.3665 | ambiguous | -0.475 | Destabilizing | 0.92 | D | 0.579 | neutral | None | None | None | None | I |
K/I | 0.4852 | ambiguous | 0.4485 | ambiguous | 0.491 | Stabilizing | 0.92 | D | 0.576 | neutral | None | None | None | None | I |
K/L | 0.4328 | ambiguous | 0.3714 | ambiguous | 0.491 | Stabilizing | 0.617 | D | 0.573 | neutral | None | None | None | None | I |
K/M | 0.3887 | ambiguous | 0.3712 | ambiguous | 0.147 | Stabilizing | 0.963 | D | 0.573 | neutral | N | 0.477731044 | None | None | I |
K/N | 0.6096 | likely_pathogenic | 0.5735 | pathogenic | 0.121 | Stabilizing | 0.549 | D | 0.565 | neutral | N | 0.462300232 | None | None | I |
K/P | 0.6124 | likely_pathogenic | 0.513 | ambiguous | 0.347 | Stabilizing | 0.92 | D | 0.605 | neutral | None | None | None | None | I |
K/Q | 0.2193 | likely_benign | 0.1775 | benign | -0.002 | Destabilizing | 0.549 | D | 0.614 | neutral | N | 0.429014378 | None | None | I |
K/R | 0.0921 | likely_benign | 0.0705 | benign | -0.111 | Destabilizing | 0.001 | N | 0.114 | neutral | N | 0.394267086 | None | None | I |
K/S | 0.6006 | likely_pathogenic | 0.5465 | ambiguous | -0.321 | Destabilizing | 0.617 | D | 0.508 | neutral | None | None | None | None | I |
K/T | 0.3559 | ambiguous | 0.3302 | benign | -0.142 | Destabilizing | 0.549 | D | 0.562 | neutral | N | 0.460241362 | None | None | I |
K/V | 0.4498 | ambiguous | 0.4082 | ambiguous | 0.347 | Stabilizing | 0.85 | D | 0.567 | neutral | None | None | None | None | I |
K/W | 0.8555 | likely_pathogenic | 0.7524 | pathogenic | -0.17 | Destabilizing | 0.992 | D | 0.677 | prob.neutral | None | None | None | None | I |
K/Y | 0.7301 | likely_pathogenic | 0.6723 | pathogenic | 0.166 | Stabilizing | 0.972 | D | 0.571 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.