Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18672 | 56239;56240;56241 | chr2:178600890;178600889;178600888 | chr2:179465617;179465616;179465615 |
N2AB | 17031 | 51316;51317;51318 | chr2:178600890;178600889;178600888 | chr2:179465617;179465616;179465615 |
N2A | 16104 | 48535;48536;48537 | chr2:178600890;178600889;178600888 | chr2:179465617;179465616;179465615 |
N2B | 9607 | 29044;29045;29046 | chr2:178600890;178600889;178600888 | chr2:179465617;179465616;179465615 |
Novex-1 | 9732 | 29419;29420;29421 | chr2:178600890;178600889;178600888 | chr2:179465617;179465616;179465615 |
Novex-2 | 9799 | 29620;29621;29622 | chr2:178600890;178600889;178600888 | chr2:179465617;179465616;179465615 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | None | None | None | N | 0.153 | 0.056 | 0.0551355673512 | gnomAD-4.0.0 | 1.59331E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43386E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4688 | ambiguous | 0.4139 | ambiguous | -0.749 | Destabilizing | 0.685 | D | 0.409 | neutral | None | None | None | None | I |
A/D | 0.3823 | ambiguous | 0.2253 | benign | 0.143 | Stabilizing | None | N | 0.397 | neutral | N | 0.392818717 | None | None | I |
A/E | 0.2768 | likely_benign | 0.2467 | benign | 0.011 | Stabilizing | None | N | 0.286 | neutral | None | None | None | None | I |
A/F | 0.3599 | ambiguous | 0.2727 | benign | -0.691 | Destabilizing | 0.366 | N | 0.507 | neutral | None | None | None | None | I |
A/G | 0.1573 | likely_benign | 0.1319 | benign | -0.298 | Destabilizing | 0.012 | N | 0.365 | neutral | N | 0.447711995 | None | None | I |
A/H | 0.4827 | ambiguous | 0.3813 | ambiguous | -0.344 | Destabilizing | 0.685 | D | 0.403 | neutral | None | None | None | None | I |
A/I | 0.2369 | likely_benign | 0.1963 | benign | -0.203 | Destabilizing | 0.039 | N | 0.471 | neutral | None | None | None | None | I |
A/K | 0.472 | ambiguous | 0.4055 | ambiguous | -0.445 | Destabilizing | 0.039 | N | 0.419 | neutral | None | None | None | None | I |
A/L | 0.1585 | likely_benign | 0.1417 | benign | -0.203 | Destabilizing | 0.039 | N | 0.441 | neutral | None | None | None | None | I |
A/M | 0.2111 | likely_benign | 0.1988 | benign | -0.346 | Destabilizing | 0.366 | N | 0.391 | neutral | None | None | None | None | I |
A/N | 0.2262 | likely_benign | 0.1571 | benign | -0.16 | Destabilizing | 0.039 | N | 0.427 | neutral | None | None | None | None | I |
A/P | 0.2134 | likely_benign | 0.1907 | benign | -0.173 | Destabilizing | 0.177 | N | 0.454 | neutral | N | 0.405094581 | None | None | I |
A/Q | 0.2961 | likely_benign | 0.2708 | benign | -0.368 | Destabilizing | 0.125 | N | 0.45 | neutral | None | None | None | None | I |
A/R | 0.4545 | ambiguous | 0.3821 | ambiguous | -0.129 | Destabilizing | 0.221 | N | 0.445 | neutral | None | None | None | None | I |
A/S | 0.0922 | likely_benign | 0.0788 | benign | -0.466 | Destabilizing | None | N | 0.153 | neutral | N | 0.409500323 | None | None | I |
A/T | 0.0863 | likely_benign | 0.0789 | benign | -0.504 | Destabilizing | 0.001 | N | 0.181 | neutral | N | 0.395283019 | None | None | I |
A/V | 0.1211 | likely_benign | 0.1056 | benign | -0.173 | Destabilizing | 0.001 | N | 0.2 | neutral | N | 0.426760719 | None | None | I |
A/W | 0.7609 | likely_pathogenic | 0.6657 | pathogenic | -0.846 | Destabilizing | 0.869 | D | 0.591 | neutral | None | None | None | None | I |
A/Y | 0.474 | ambiguous | 0.377 | ambiguous | -0.477 | Destabilizing | 0.366 | N | 0.467 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.