Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18680 | 56263;56264;56265 | chr2:178600866;178600865;178600864 | chr2:179465593;179465592;179465591 |
N2AB | 17039 | 51340;51341;51342 | chr2:178600866;178600865;178600864 | chr2:179465593;179465592;179465591 |
N2A | 16112 | 48559;48560;48561 | chr2:178600866;178600865;178600864 | chr2:179465593;179465592;179465591 |
N2B | 9615 | 29068;29069;29070 | chr2:178600866;178600865;178600864 | chr2:179465593;179465592;179465591 |
Novex-1 | 9740 | 29443;29444;29445 | chr2:178600866;178600865;178600864 | chr2:179465593;179465592;179465591 |
Novex-2 | 9807 | 29644;29645;29646 | chr2:178600866;178600865;178600864 | chr2:179465593;179465592;179465591 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | None | N | None | 0.17 | None | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4224 | ambiguous | 0.3979 | ambiguous | -0.268 | Destabilizing | None | None | None | None | None | None | None | None | N |
K/C | 0.6647 | likely_pathogenic | 0.6681 | pathogenic | -0.392 | Destabilizing | None | None | None | None | None | None | None | None | N |
K/D | 0.7834 | likely_pathogenic | 0.7517 | pathogenic | -0.045 | Destabilizing | None | None | None | None | None | None | None | None | N |
K/E | 0.208 | likely_benign | 0.1936 | benign | 0.021 | Stabilizing | None | None | None | None | N | 0.466459897 | None | None | N |
K/F | 0.7992 | likely_pathogenic | 0.7826 | pathogenic | -0.098 | Destabilizing | None | None | None | None | None | None | None | None | N |
K/G | 0.6348 | likely_pathogenic | 0.588 | pathogenic | -0.587 | Destabilizing | None | None | None | None | None | None | None | None | N |
K/H | 0.3824 | ambiguous | 0.3552 | ambiguous | -0.951 | Destabilizing | None | None | None | None | None | None | None | None | N |
K/I | 0.3279 | likely_benign | 0.3255 | benign | 0.531 | Stabilizing | None | None | None | None | N | 0.482632504 | None | None | N |
K/L | 0.4093 | ambiguous | 0.386 | ambiguous | 0.531 | Stabilizing | None | None | None | None | None | None | None | None | N |
K/M | 0.2286 | likely_benign | 0.2192 | benign | 0.366 | Stabilizing | None | None | None | None | None | None | None | None | N |
K/N | 0.5743 | likely_pathogenic | 0.5302 | ambiguous | -0.184 | Destabilizing | None | None | None | None | N | 0.51472641 | None | None | N |
K/P | 0.9575 | likely_pathogenic | 0.9481 | pathogenic | 0.296 | Stabilizing | None | None | None | None | None | None | None | None | N |
K/Q | 0.143 | likely_benign | 0.1326 | benign | -0.326 | Destabilizing | 0.012 | N | 0.51 | neutral | N | 0.509299171 | None | None | N |
K/R | 0.0905 | likely_benign | 0.0873 | benign | -0.441 | Destabilizing | None | None | None | None | N | 0.493388356 | None | None | N |
K/S | 0.5116 | ambiguous | 0.4805 | ambiguous | -0.771 | Destabilizing | None | None | None | None | None | None | None | None | N |
K/T | 0.1909 | likely_benign | 0.1799 | benign | -0.521 | Destabilizing | None | None | None | None | N | 0.4785179 | None | None | N |
K/V | 0.2969 | likely_benign | 0.303 | benign | 0.296 | Stabilizing | None | None | None | None | None | None | None | None | N |
K/W | 0.7993 | likely_pathogenic | 0.7781 | pathogenic | -0.001 | Destabilizing | None | None | None | None | None | None | None | None | N |
K/Y | 0.7223 | likely_pathogenic | 0.7026 | pathogenic | 0.299 | Stabilizing | None | None | None | None | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.