Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18689 | 56290;56291;56292 | chr2:178599836;178599835;178599834 | chr2:179464563;179464562;179464561 |
N2AB | 17048 | 51367;51368;51369 | chr2:178599836;178599835;178599834 | chr2:179464563;179464562;179464561 |
N2A | 16121 | 48586;48587;48588 | chr2:178599836;178599835;178599834 | chr2:179464563;179464562;179464561 |
N2B | 9624 | 29095;29096;29097 | chr2:178599836;178599835;178599834 | chr2:179464563;179464562;179464561 |
Novex-1 | 9749 | 29470;29471;29472 | chr2:178599836;178599835;178599834 | chr2:179464563;179464562;179464561 |
Novex-2 | 9816 | 29671;29672;29673 | chr2:178599836;178599835;178599834 | chr2:179464563;179464562;179464561 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs763814390 | 0.034 | 0.117 | N | 0.327 | 0.145 | 0.242825505644 | gnomAD-2.1.1 | 1.34E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 5.65185E-04 |
D/N | rs763814390 | 0.034 | 0.117 | N | 0.327 | 0.145 | 0.242825505644 | gnomAD-4.0.0 | 8.31067E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 9.93049E-04 | 0 | 0 | 3.13716E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1249 | likely_benign | 0.1163 | benign | -0.027 | Destabilizing | 0.062 | N | 0.293 | neutral | N | 0.512331981 | None | None | N |
D/C | 0.4985 | ambiguous | 0.4427 | ambiguous | -0.112 | Destabilizing | 0.935 | D | 0.392 | neutral | None | None | None | None | N |
D/E | 0.0828 | likely_benign | 0.0761 | benign | -0.316 | Destabilizing | None | N | 0.15 | neutral | N | 0.405913805 | None | None | N |
D/F | 0.4106 | ambiguous | 0.3527 | ambiguous | 0.225 | Stabilizing | 0.38 | N | 0.361 | neutral | None | None | None | None | N |
D/G | 0.2155 | likely_benign | 0.1987 | benign | -0.253 | Destabilizing | 0.117 | N | 0.287 | neutral | N | 0.512852056 | None | None | N |
D/H | 0.1976 | likely_benign | 0.1789 | benign | 0.553 | Stabilizing | 0.484 | N | 0.309 | neutral | N | 0.513372131 | None | None | N |
D/I | 0.1499 | likely_benign | 0.1277 | benign | 0.522 | Stabilizing | 0.235 | N | 0.361 | neutral | None | None | None | None | N |
D/K | 0.2549 | likely_benign | 0.2347 | benign | 0.41 | Stabilizing | 0.081 | N | 0.29 | neutral | None | None | None | None | N |
D/L | 0.1922 | likely_benign | 0.1749 | benign | 0.522 | Stabilizing | 0.001 | N | 0.276 | neutral | None | None | None | None | N |
D/M | 0.342 | ambiguous | 0.3045 | benign | 0.387 | Stabilizing | 0.38 | N | 0.361 | neutral | None | None | None | None | N |
D/N | 0.0955 | likely_benign | 0.091 | benign | -0.099 | Destabilizing | 0.117 | N | 0.327 | neutral | N | 0.482875866 | None | None | N |
D/P | 0.8318 | likely_pathogenic | 0.7891 | pathogenic | 0.363 | Stabilizing | 0.555 | D | 0.325 | neutral | None | None | None | None | N |
D/Q | 0.1925 | likely_benign | 0.1728 | benign | -0.017 | Destabilizing | 0.016 | N | 0.162 | neutral | None | None | None | None | N |
D/R | 0.3269 | likely_benign | 0.2924 | benign | 0.696 | Stabilizing | 0.235 | N | 0.341 | neutral | None | None | None | None | N |
D/S | 0.1049 | likely_benign | 0.0975 | benign | -0.176 | Destabilizing | 0.081 | N | 0.237 | neutral | None | None | None | None | N |
D/T | 0.1267 | likely_benign | 0.1199 | benign | 0.014 | Stabilizing | 0.149 | N | 0.332 | neutral | None | None | None | None | N |
D/V | 0.0981 | likely_benign | 0.0901 | benign | 0.363 | Stabilizing | 0.062 | N | 0.336 | neutral | N | 0.513198773 | None | None | N |
D/W | 0.7834 | likely_pathogenic | 0.7275 | pathogenic | 0.365 | Stabilizing | 0.935 | D | 0.462 | neutral | None | None | None | None | N |
D/Y | 0.1864 | likely_benign | 0.1734 | benign | 0.481 | Stabilizing | 0.741 | D | 0.361 | neutral | N | 0.513718848 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.