Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18698 | 56317;56318;56319 | chr2:178599809;178599808;178599807 | chr2:179464536;179464535;179464534 |
N2AB | 17057 | 51394;51395;51396 | chr2:178599809;178599808;178599807 | chr2:179464536;179464535;179464534 |
N2A | 16130 | 48613;48614;48615 | chr2:178599809;178599808;178599807 | chr2:179464536;179464535;179464534 |
N2B | 9633 | 29122;29123;29124 | chr2:178599809;178599808;178599807 | chr2:179464536;179464535;179464534 |
Novex-1 | 9758 | 29497;29498;29499 | chr2:178599809;178599808;178599807 | chr2:179464536;179464535;179464534 |
Novex-2 | 9825 | 29698;29699;29700 | chr2:178599809;178599808;178599807 | chr2:179464536;179464535;179464534 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.999 | N | 0.462 | 0.254 | 0.316788114976 | gnomAD-4.0.0 | 1.37783E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80515E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2522 | likely_benign | 0.2281 | benign | -0.802 | Destabilizing | 0.999 | D | 0.627 | neutral | N | 0.453189598 | None | None | N |
E/C | 0.9483 | likely_pathogenic | 0.9493 | pathogenic | -0.156 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
E/D | 0.5117 | ambiguous | 0.5806 | pathogenic | -0.764 | Destabilizing | 0.999 | D | 0.462 | neutral | N | 0.510296462 | None | None | N |
E/F | 0.9549 | likely_pathogenic | 0.9548 | pathogenic | -0.757 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
E/G | 0.5392 | ambiguous | 0.564 | ambiguous | -1.051 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | N | 0.490475954 | None | None | N |
E/H | 0.8695 | likely_pathogenic | 0.8808 | pathogenic | -0.896 | Destabilizing | 1.0 | D | 0.676 | prob.neutral | None | None | None | None | N |
E/I | 0.6351 | likely_pathogenic | 0.6233 | pathogenic | -0.156 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
E/K | 0.4763 | ambiguous | 0.5209 | ambiguous | -0.077 | Destabilizing | 0.999 | D | 0.609 | neutral | N | 0.498116598 | None | None | N |
E/L | 0.7529 | likely_pathogenic | 0.7612 | pathogenic | -0.156 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
E/M | 0.7107 | likely_pathogenic | 0.6821 | pathogenic | 0.277 | Stabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
E/N | 0.6776 | likely_pathogenic | 0.7014 | pathogenic | -0.387 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
E/P | 0.9309 | likely_pathogenic | 0.9593 | pathogenic | -0.352 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
E/Q | 0.279 | likely_benign | 0.2716 | benign | -0.369 | Destabilizing | 1.0 | D | 0.639 | neutral | N | 0.480320271 | None | None | N |
E/R | 0.6544 | likely_pathogenic | 0.6904 | pathogenic | 0.023 | Stabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
E/S | 0.5001 | ambiguous | 0.4911 | ambiguous | -0.609 | Destabilizing | 0.999 | D | 0.663 | neutral | None | None | None | None | N |
E/T | 0.551 | ambiguous | 0.5591 | ambiguous | -0.406 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
E/V | 0.4296 | ambiguous | 0.4121 | ambiguous | -0.352 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | N | 0.475469025 | None | None | N |
E/W | 0.9864 | likely_pathogenic | 0.9888 | pathogenic | -0.585 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | N |
E/Y | 0.9118 | likely_pathogenic | 0.9217 | pathogenic | -0.509 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.