Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18699 | 56320;56321;56322 | chr2:178599806;178599805;178599804 | chr2:179464533;179464532;179464531 |
N2AB | 17058 | 51397;51398;51399 | chr2:178599806;178599805;178599804 | chr2:179464533;179464532;179464531 |
N2A | 16131 | 48616;48617;48618 | chr2:178599806;178599805;178599804 | chr2:179464533;179464532;179464531 |
N2B | 9634 | 29125;29126;29127 | chr2:178599806;178599805;178599804 | chr2:179464533;179464532;179464531 |
Novex-1 | 9759 | 29500;29501;29502 | chr2:178599806;178599805;178599804 | chr2:179464533;179464532;179464531 |
Novex-2 | 9826 | 29701;29702;29703 | chr2:178599806;178599805;178599804 | chr2:179464533;179464532;179464531 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/E | rs1060500533 | None | 1.0 | D | 0.772 | 0.721 | 0.860385415557 | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 0 | 2.62329E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.3786 | ambiguous | 0.4129 | ambiguous | -0.427 | Destabilizing | 1.0 | D | 0.682 | prob.neutral | D | 0.596430538 | None | None | N |
G/C | 0.5388 | ambiguous | 0.5714 | pathogenic | -0.922 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
G/D | 0.2709 | likely_benign | 0.3244 | benign | -1.08 | Destabilizing | 0.921 | D | 0.573 | neutral | None | None | None | None | N |
G/E | 0.3942 | ambiguous | 0.4676 | ambiguous | -1.246 | Destabilizing | 1.0 | D | 0.772 | deleterious | D | 0.591535438 | None | None | N |
G/F | 0.8399 | likely_pathogenic | 0.8486 | pathogenic | -1.253 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
G/H | 0.6348 | likely_pathogenic | 0.6779 | pathogenic | -0.645 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
G/I | 0.8132 | likely_pathogenic | 0.8528 | pathogenic | -0.572 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
G/K | 0.5461 | ambiguous | 0.6462 | pathogenic | -0.837 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
G/L | 0.7771 | likely_pathogenic | 0.7929 | pathogenic | -0.572 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
G/M | 0.7515 | likely_pathogenic | 0.7703 | pathogenic | -0.376 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
G/N | 0.3271 | likely_benign | 0.3456 | ambiguous | -0.562 | Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
G/P | 0.9891 | likely_pathogenic | 0.9907 | pathogenic | -0.492 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
G/Q | 0.5268 | ambiguous | 0.5915 | pathogenic | -0.935 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
G/R | 0.5153 | ambiguous | 0.6142 | pathogenic | -0.328 | Destabilizing | 1.0 | D | 0.805 | deleterious | D | 0.612883868 | None | None | N |
G/S | 0.2557 | likely_benign | 0.2677 | benign | -0.659 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
G/T | 0.5125 | ambiguous | 0.5447 | ambiguous | -0.773 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
G/V | 0.7059 | likely_pathogenic | 0.7544 | pathogenic | -0.492 | Destabilizing | 1.0 | D | 0.793 | deleterious | D | 0.622372258 | None | None | N |
G/W | 0.7369 | likely_pathogenic | 0.7817 | pathogenic | -1.372 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
G/Y | 0.6828 | likely_pathogenic | 0.7211 | pathogenic | -1.022 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.