Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18717 | 56374;56375;56376 | chr2:178599752;178599751;178599750 | chr2:179464479;179464478;179464477 |
N2AB | 17076 | 51451;51452;51453 | chr2:178599752;178599751;178599750 | chr2:179464479;179464478;179464477 |
N2A | 16149 | 48670;48671;48672 | chr2:178599752;178599751;178599750 | chr2:179464479;179464478;179464477 |
N2B | 9652 | 29179;29180;29181 | chr2:178599752;178599751;178599750 | chr2:179464479;179464478;179464477 |
Novex-1 | 9777 | 29554;29555;29556 | chr2:178599752;178599751;178599750 | chr2:179464479;179464478;179464477 |
Novex-2 | 9844 | 29755;29756;29757 | chr2:178599752;178599751;178599750 | chr2:179464479;179464478;179464477 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs794729460 | 0.605 | 0.885 | D | 0.603 | 0.338 | 0.442054744378 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
T/I | rs794729460 | 0.605 | 0.885 | D | 0.603 | 0.338 | 0.442054744378 | gnomAD-4.0.0 | 2.05405E-06 | None | None | None | None | N | None | 5.98587E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99878E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1133 | likely_benign | 0.1075 | benign | -0.833 | Destabilizing | 0.863 | D | 0.545 | neutral | N | 0.494695685 | None | None | N |
T/C | 0.4386 | ambiguous | 0.3851 | ambiguous | -0.433 | Destabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | N |
T/D | 0.4207 | ambiguous | 0.3529 | ambiguous | -0.102 | Destabilizing | 0.986 | D | 0.621 | neutral | None | None | None | None | N |
T/E | 0.2424 | likely_benign | 0.2188 | benign | -0.016 | Destabilizing | 0.91 | D | 0.613 | neutral | None | None | None | None | N |
T/F | 0.2707 | likely_benign | 0.2301 | benign | -0.754 | Destabilizing | 0.993 | D | 0.722 | prob.delet. | None | None | None | None | N |
T/G | 0.3645 | ambiguous | 0.3286 | benign | -1.15 | Destabilizing | 0.986 | D | 0.654 | neutral | None | None | None | None | N |
T/H | 0.2084 | likely_benign | 0.1704 | benign | -1.157 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | None | None | None | None | N |
T/I | 0.1443 | likely_benign | 0.136 | benign | -0.053 | Destabilizing | 0.885 | D | 0.603 | neutral | D | 0.5283658 | None | None | N |
T/K | 0.1708 | likely_benign | 0.1409 | benign | -0.418 | Destabilizing | 0.128 | N | 0.386 | neutral | None | None | None | None | N |
T/L | 0.1029 | likely_benign | 0.0929 | benign | -0.053 | Destabilizing | 0.91 | D | 0.553 | neutral | None | None | None | None | N |
T/M | 0.1004 | likely_benign | 0.0948 | benign | -0.071 | Destabilizing | 0.998 | D | 0.672 | neutral | None | None | None | None | N |
T/N | 0.1279 | likely_benign | 0.1147 | benign | -0.631 | Destabilizing | 0.982 | D | 0.549 | neutral | N | 0.501799256 | None | None | N |
T/P | 0.7215 | likely_pathogenic | 0.5882 | pathogenic | -0.281 | Destabilizing | 0.991 | D | 0.666 | neutral | D | 0.538768235 | None | None | N |
T/Q | 0.1717 | likely_benign | 0.1538 | benign | -0.581 | Destabilizing | 0.986 | D | 0.667 | neutral | None | None | None | None | N |
T/R | 0.165 | likely_benign | 0.1315 | benign | -0.334 | Destabilizing | 0.973 | D | 0.643 | neutral | None | None | None | None | N |
T/S | 0.1132 | likely_benign | 0.1051 | benign | -0.964 | Destabilizing | 0.939 | D | 0.537 | neutral | N | 0.504656648 | None | None | N |
T/V | 0.135 | likely_benign | 0.1283 | benign | -0.281 | Destabilizing | 0.214 | N | 0.413 | neutral | None | None | None | None | N |
T/W | 0.6575 | likely_pathogenic | 0.5643 | pathogenic | -0.789 | Destabilizing | 0.999 | D | 0.695 | prob.neutral | None | None | None | None | N |
T/Y | 0.2746 | likely_benign | 0.2405 | benign | -0.485 | Destabilizing | 0.998 | D | 0.727 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.