Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18720 | 56383;56384;56385 | chr2:178599743;178599742;178599741 | chr2:179464470;179464469;179464468 |
N2AB | 17079 | 51460;51461;51462 | chr2:178599743;178599742;178599741 | chr2:179464470;179464469;179464468 |
N2A | 16152 | 48679;48680;48681 | chr2:178599743;178599742;178599741 | chr2:179464470;179464469;179464468 |
N2B | 9655 | 29188;29189;29190 | chr2:178599743;178599742;178599741 | chr2:179464470;179464469;179464468 |
Novex-1 | 9780 | 29563;29564;29565 | chr2:178599743;178599742;178599741 | chr2:179464470;179464469;179464468 |
Novex-2 | 9847 | 29764;29765;29766 | chr2:178599743;178599742;178599741 | chr2:179464470;179464469;179464468 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | rs1200935663 | -1.425 | 0.83 | N | 0.726 | 0.377 | 0.32580497728 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
K/T | rs1200935663 | -1.425 | 0.83 | N | 0.726 | 0.377 | 0.32580497728 | gnomAD-4.0.0 | 3.18682E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72354E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.87 | likely_pathogenic | 0.8332 | pathogenic | -0.796 | Destabilizing | 0.648 | D | 0.62 | neutral | None | None | None | None | N |
K/C | 0.8227 | likely_pathogenic | 0.7934 | pathogenic | -0.903 | Destabilizing | 0.993 | D | 0.818 | deleterious | None | None | None | None | N |
K/D | 0.9828 | likely_pathogenic | 0.9803 | pathogenic | -0.337 | Destabilizing | 0.866 | D | 0.753 | deleterious | None | None | None | None | N |
K/E | 0.7614 | likely_pathogenic | 0.7014 | pathogenic | -0.174 | Destabilizing | 0.41 | N | 0.565 | neutral | N | 0.505420793 | None | None | N |
K/F | 0.9017 | likely_pathogenic | 0.8712 | pathogenic | -0.326 | Destabilizing | 0.98 | D | 0.82 | deleterious | None | None | None | None | N |
K/G | 0.9506 | likely_pathogenic | 0.9356 | pathogenic | -1.21 | Destabilizing | 0.866 | D | 0.732 | prob.delet. | None | None | None | None | N |
K/H | 0.5191 | ambiguous | 0.4536 | ambiguous | -1.527 | Destabilizing | 0.98 | D | 0.766 | deleterious | None | None | None | None | N |
K/I | 0.6703 | likely_pathogenic | 0.6248 | pathogenic | 0.306 | Stabilizing | 0.908 | D | 0.824 | deleterious | N | 0.490163694 | None | None | N |
K/L | 0.6523 | likely_pathogenic | 0.6011 | pathogenic | 0.306 | Stabilizing | 0.866 | D | 0.732 | prob.delet. | None | None | None | None | N |
K/M | 0.5555 | ambiguous | 0.4896 | ambiguous | 0.092 | Stabilizing | 0.993 | D | 0.76 | deleterious | None | None | None | None | N |
K/N | 0.9334 | likely_pathogenic | 0.9197 | pathogenic | -0.753 | Destabilizing | 0.83 | D | 0.719 | prob.delet. | N | 0.491177652 | None | None | N |
K/P | 0.9871 | likely_pathogenic | 0.9835 | pathogenic | -0.032 | Destabilizing | 0.929 | D | 0.757 | deleterious | None | None | None | None | N |
K/Q | 0.356 | ambiguous | 0.3028 | benign | -0.733 | Destabilizing | 0.83 | D | 0.713 | prob.delet. | N | 0.504660325 | None | None | N |
K/R | 0.097 | likely_benign | 0.0893 | benign | -0.772 | Destabilizing | 0.01 | N | 0.383 | neutral | N | 0.492518778 | None | None | N |
K/S | 0.9145 | likely_pathogenic | 0.8826 | pathogenic | -1.445 | Destabilizing | 0.648 | D | 0.593 | neutral | None | None | None | None | N |
K/T | 0.6925 | likely_pathogenic | 0.6196 | pathogenic | -1.052 | Destabilizing | 0.83 | D | 0.726 | prob.delet. | N | 0.479567857 | None | None | N |
K/V | 0.6444 | likely_pathogenic | 0.5945 | pathogenic | -0.032 | Destabilizing | 0.866 | D | 0.762 | deleterious | None | None | None | None | N |
K/W | 0.8806 | likely_pathogenic | 0.8338 | pathogenic | -0.198 | Destabilizing | 0.993 | D | 0.805 | deleterious | None | None | None | None | N |
K/Y | 0.8174 | likely_pathogenic | 0.777 | pathogenic | 0.109 | Stabilizing | 0.929 | D | 0.806 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.