Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18724 | 56395;56396;56397 | chr2:178599731;178599730;178599729 | chr2:179464458;179464457;179464456 |
N2AB | 17083 | 51472;51473;51474 | chr2:178599731;178599730;178599729 | chr2:179464458;179464457;179464456 |
N2A | 16156 | 48691;48692;48693 | chr2:178599731;178599730;178599729 | chr2:179464458;179464457;179464456 |
N2B | 9659 | 29200;29201;29202 | chr2:178599731;178599730;178599729 | chr2:179464458;179464457;179464456 |
Novex-1 | 9784 | 29575;29576;29577 | chr2:178599731;178599730;178599729 | chr2:179464458;179464457;179464456 |
Novex-2 | 9851 | 29776;29777;29778 | chr2:178599731;178599730;178599729 | chr2:179464458;179464457;179464456 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1559671221 | None | 0.012 | N | 0.329 | 0.173 | 0.243972157842 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
K/E | rs1559671221 | None | 0.012 | N | 0.329 | 0.173 | 0.243972157842 | gnomAD-4.0.0 | 2.7383E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.5993E-06 | 0 | 0 |
K/R | rs201091423 | 0.182 | None | N | 0.231 | 0.087 | None | gnomAD-2.1.1 | 5.37E-05 | None | None | None | None | N | None | 4.14E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.0973E-04 | 0 |
K/R | rs201091423 | 0.182 | None | N | 0.231 | 0.087 | None | gnomAD-3.1.2 | 5.92E-05 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.17689E-04 | 0 | 0 |
K/R | rs201091423 | 0.182 | None | N | 0.231 | 0.087 | None | gnomAD-4.0.0 | 4.21579E-05 | None | None | None | None | N | None | 2.66702E-05 | 1.66806E-05 | None | 0 | 0 | None | 1.56235E-05 | 0 | 5.42682E-05 | 0 | 0 |
K/T | rs201091423 | 0.051 | 0.055 | N | 0.329 | 0.135 | 0.256283259241 | gnomAD-2.1.1 | 2.02E-05 | None | None | None | None | N | None | 1.2945E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.67E-05 | 0 |
K/T | rs201091423 | 0.051 | 0.055 | N | 0.329 | 0.135 | 0.256283259241 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/T | rs201091423 | 0.051 | 0.055 | N | 0.329 | 0.135 | 0.256283259241 | gnomAD-4.0.0 | 1.79804E-05 | None | None | None | None | N | None | 2.67137E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.20463E-05 | 0 | 1.6019E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2014 | likely_benign | 0.1759 | benign | 0.077 | Stabilizing | None | N | 0.117 | neutral | None | None | None | None | N |
K/C | 0.5204 | ambiguous | 0.4876 | ambiguous | -0.365 | Destabilizing | 0.864 | D | 0.355 | neutral | None | None | None | None | N |
K/D | 0.3068 | likely_benign | 0.2811 | benign | -0.324 | Destabilizing | None | N | 0.205 | neutral | None | None | None | None | N |
K/E | 0.1128 | likely_benign | 0.1111 | benign | -0.321 | Destabilizing | 0.012 | N | 0.329 | neutral | N | 0.399433337 | None | None | N |
K/F | 0.5647 | likely_pathogenic | 0.4984 | ambiguous | -0.23 | Destabilizing | 0.356 | N | 0.36 | neutral | None | None | None | None | N |
K/G | 0.2153 | likely_benign | 0.1887 | benign | -0.066 | Destabilizing | None | N | 0.16 | neutral | None | None | None | None | N |
K/H | 0.2257 | likely_benign | 0.1993 | benign | -0.173 | Destabilizing | 0.356 | N | 0.35 | neutral | None | None | None | None | N |
K/I | 0.2712 | likely_benign | 0.2363 | benign | 0.377 | Stabilizing | 0.356 | N | 0.397 | neutral | None | None | None | None | N |
K/L | 0.2383 | likely_benign | 0.1947 | benign | 0.377 | Stabilizing | 0.072 | N | 0.355 | neutral | None | None | None | None | N |
K/M | 0.2028 | likely_benign | 0.1649 | benign | -0.137 | Destabilizing | 0.56 | D | 0.35 | neutral | N | 0.441669536 | None | None | N |
K/N | 0.2364 | likely_benign | 0.2062 | benign | 0.079 | Stabilizing | 0.055 | N | 0.301 | neutral | N | 0.467063839 | None | None | N |
K/P | 0.3663 | ambiguous | 0.3695 | ambiguous | 0.301 | Stabilizing | 0.136 | N | 0.385 | neutral | None | None | None | None | N |
K/Q | 0.0986 | likely_benign | 0.0906 | benign | -0.024 | Destabilizing | 0.001 | N | 0.214 | neutral | N | 0.440629386 | None | None | N |
K/R | 0.0745 | likely_benign | 0.0712 | benign | -0.033 | Destabilizing | None | N | 0.231 | neutral | N | 0.453193251 | None | None | N |
K/S | 0.2266 | likely_benign | 0.1931 | benign | -0.223 | Destabilizing | 0.016 | N | 0.301 | neutral | None | None | None | None | N |
K/T | 0.145 | likely_benign | 0.1284 | benign | -0.102 | Destabilizing | 0.055 | N | 0.329 | neutral | N | 0.475992753 | None | None | N |
K/V | 0.2225 | likely_benign | 0.1912 | benign | 0.301 | Stabilizing | 0.072 | N | 0.378 | neutral | None | None | None | None | N |
K/W | 0.6025 | likely_pathogenic | 0.5261 | ambiguous | -0.372 | Destabilizing | 0.864 | D | 0.382 | neutral | None | None | None | None | N |
K/Y | 0.445 | ambiguous | 0.3952 | ambiguous | -0.016 | Destabilizing | 0.356 | N | 0.362 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.