Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18740 | 56443;56444;56445 | chr2:178599683;178599682;178599681 | chr2:179464410;179464409;179464408 |
N2AB | 17099 | 51520;51521;51522 | chr2:178599683;178599682;178599681 | chr2:179464410;179464409;179464408 |
N2A | 16172 | 48739;48740;48741 | chr2:178599683;178599682;178599681 | chr2:179464410;179464409;179464408 |
N2B | 9675 | 29248;29249;29250 | chr2:178599683;178599682;178599681 | chr2:179464410;179464409;179464408 |
Novex-1 | 9800 | 29623;29624;29625 | chr2:178599683;178599682;178599681 | chr2:179464410;179464409;179464408 |
Novex-2 | 9867 | 29824;29825;29826 | chr2:178599683;178599682;178599681 | chr2:179464410;179464409;179464408 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 1.0 | N | 0.677 | 0.315 | 0.214338557667 | gnomAD-4.0.0 | 1.59287E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86123E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7685 | likely_pathogenic | 0.7678 | pathogenic | -1.194 | Destabilizing | 0.999 | D | 0.63 | neutral | None | None | None | None | I |
K/C | 0.8235 | likely_pathogenic | 0.8257 | pathogenic | -1.037 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | I |
K/D | 0.9243 | likely_pathogenic | 0.9331 | pathogenic | -1.106 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | I |
K/E | 0.485 | ambiguous | 0.5014 | ambiguous | -0.885 | Destabilizing | 0.999 | D | 0.57 | neutral | N | 0.493423721 | None | None | I |
K/F | 0.9389 | likely_pathogenic | 0.9265 | pathogenic | -0.473 | Destabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | I |
K/G | 0.8694 | likely_pathogenic | 0.8734 | pathogenic | -1.627 | Destabilizing | 1.0 | D | 0.623 | neutral | None | None | None | None | I |
K/H | 0.5478 | ambiguous | 0.5488 | ambiguous | -1.513 | Destabilizing | 1.0 | D | 0.642 | neutral | None | None | None | None | I |
K/I | 0.6204 | likely_pathogenic | 0.5877 | pathogenic | 0.001 | Stabilizing | 1.0 | D | 0.654 | neutral | N | 0.458460211 | None | None | I |
K/L | 0.6302 | likely_pathogenic | 0.6092 | pathogenic | 0.001 | Stabilizing | 1.0 | D | 0.623 | neutral | None | None | None | None | I |
K/M | 0.4512 | ambiguous | 0.4283 | ambiguous | -0.261 | Destabilizing | 1.0 | D | 0.641 | neutral | None | None | None | None | I |
K/N | 0.8223 | likely_pathogenic | 0.8354 | pathogenic | -1.294 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | N | 0.516588582 | None | None | I |
K/P | 0.946 | likely_pathogenic | 0.9517 | pathogenic | -0.373 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | I |
K/Q | 0.2662 | likely_benign | 0.2835 | benign | -1.115 | Destabilizing | 1.0 | D | 0.665 | neutral | N | 0.484900238 | None | None | I |
K/R | 0.1297 | likely_benign | 0.1299 | benign | -0.898 | Destabilizing | 0.999 | D | 0.566 | neutral | N | 0.490556774 | None | None | I |
K/S | 0.8186 | likely_pathogenic | 0.8235 | pathogenic | -1.868 | Destabilizing | 0.999 | D | 0.628 | neutral | None | None | None | None | I |
K/T | 0.4183 | ambiguous | 0.4134 | ambiguous | -1.412 | Destabilizing | 1.0 | D | 0.673 | neutral | N | 0.488516546 | None | None | I |
K/V | 0.5613 | ambiguous | 0.5388 | ambiguous | -0.373 | Destabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | I |
K/W | 0.9347 | likely_pathogenic | 0.9231 | pathogenic | -0.413 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | I |
K/Y | 0.8186 | likely_pathogenic | 0.793 | pathogenic | -0.188 | Destabilizing | 1.0 | D | 0.628 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.