Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18742 | 56449;56450;56451 | chr2:178599677;178599676;178599675 | chr2:179464404;179464403;179464402 |
N2AB | 17101 | 51526;51527;51528 | chr2:178599677;178599676;178599675 | chr2:179464404;179464403;179464402 |
N2A | 16174 | 48745;48746;48747 | chr2:178599677;178599676;178599675 | chr2:179464404;179464403;179464402 |
N2B | 9677 | 29254;29255;29256 | chr2:178599677;178599676;178599675 | chr2:179464404;179464403;179464402 |
Novex-1 | 9802 | 29629;29630;29631 | chr2:178599677;178599676;178599675 | chr2:179464404;179464403;179464402 |
Novex-2 | 9869 | 29830;29831;29832 | chr2:178599677;178599676;178599675 | chr2:179464404;179464403;179464402 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.999 | N | 0.691 | 0.476 | 0.679835815318 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
V/M | None | None | 1.0 | D | 0.725 | 0.349 | 0.57179433898 | gnomAD-4.0.0 | 1.36901E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79952E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2905 | likely_benign | 0.2232 | benign | -0.638 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | N | 0.511644122 | None | None | I |
V/C | 0.8501 | likely_pathogenic | 0.8042 | pathogenic | -0.812 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | I |
V/D | 0.7073 | likely_pathogenic | 0.585 | pathogenic | -0.034 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | I |
V/E | 0.5774 | likely_pathogenic | 0.4513 | ambiguous | -0.091 | Destabilizing | 1.0 | D | 0.783 | deleterious | N | 0.511644122 | None | None | I |
V/F | 0.3575 | ambiguous | 0.2699 | benign | -0.549 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | I |
V/G | 0.5129 | ambiguous | 0.4109 | ambiguous | -0.849 | Destabilizing | 1.0 | D | 0.779 | deleterious | N | 0.489797841 | None | None | I |
V/H | 0.8213 | likely_pathogenic | 0.7414 | pathogenic | -0.304 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | I |
V/I | 0.0931 | likely_benign | 0.0838 | benign | -0.207 | Destabilizing | 0.998 | D | 0.612 | neutral | None | None | None | None | I |
V/K | 0.7192 | likely_pathogenic | 0.621 | pathogenic | -0.553 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | I |
V/L | 0.3447 | ambiguous | 0.2581 | benign | -0.207 | Destabilizing | 0.997 | D | 0.673 | neutral | N | 0.486287104 | None | None | I |
V/M | 0.2665 | likely_benign | 0.2004 | benign | -0.387 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | D | 0.536638567 | None | None | I |
V/N | 0.5972 | likely_pathogenic | 0.4774 | ambiguous | -0.37 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | I |
V/P | 0.7919 | likely_pathogenic | 0.7361 | pathogenic | -0.314 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | I |
V/Q | 0.6102 | likely_pathogenic | 0.5127 | ambiguous | -0.511 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | I |
V/R | 0.6654 | likely_pathogenic | 0.5745 | pathogenic | -0.115 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | I |
V/S | 0.445 | ambiguous | 0.3404 | ambiguous | -0.87 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | I |
V/T | 0.2706 | likely_benign | 0.1993 | benign | -0.806 | Destabilizing | 0.999 | D | 0.74 | deleterious | None | None | None | None | I |
V/W | 0.9351 | likely_pathogenic | 0.8949 | pathogenic | -0.648 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | I |
V/Y | 0.7936 | likely_pathogenic | 0.7159 | pathogenic | -0.354 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.