Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18744 | 56455;56456;56457 | chr2:178599671;178599670;178599669 | chr2:179464398;179464397;179464396 |
N2AB | 17103 | 51532;51533;51534 | chr2:178599671;178599670;178599669 | chr2:179464398;179464397;179464396 |
N2A | 16176 | 48751;48752;48753 | chr2:178599671;178599670;178599669 | chr2:179464398;179464397;179464396 |
N2B | 9679 | 29260;29261;29262 | chr2:178599671;178599670;178599669 | chr2:179464398;179464397;179464396 |
Novex-1 | 9804 | 29635;29636;29637 | chr2:178599671;178599670;178599669 | chr2:179464398;179464397;179464396 |
Novex-2 | 9871 | 29836;29837;29838 | chr2:178599671;178599670;178599669 | chr2:179464398;179464397;179464396 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | None | None | 0.896 | N | 0.369 | 0.298 | 0.290962096972 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1881 | likely_benign | 0.1446 | benign | -0.009 | Destabilizing | 0.896 | D | 0.369 | neutral | N | 0.499711322 | None | None | I |
D/C | 0.6852 | likely_pathogenic | 0.5908 | pathogenic | -0.093 | Destabilizing | 0.999 | D | 0.545 | neutral | None | None | None | None | I |
D/E | 0.1522 | likely_benign | 0.1248 | benign | -0.256 | Destabilizing | 0.011 | N | 0.11 | neutral | N | 0.482066924 | None | None | I |
D/F | 0.7191 | likely_pathogenic | 0.6229 | pathogenic | -0.056 | Destabilizing | 0.996 | D | 0.485 | neutral | None | None | None | None | I |
D/G | 0.14 | likely_benign | 0.1071 | benign | -0.136 | Destabilizing | 0.896 | D | 0.337 | neutral | N | 0.467556044 | None | None | I |
D/H | 0.3508 | ambiguous | 0.2644 | benign | 0.468 | Stabilizing | 0.984 | D | 0.388 | neutral | N | 0.512891263 | None | None | I |
D/I | 0.5827 | likely_pathogenic | 0.4538 | ambiguous | 0.258 | Stabilizing | 0.988 | D | 0.481 | neutral | None | None | None | None | I |
D/K | 0.3533 | ambiguous | 0.255 | benign | 0.442 | Stabilizing | 0.851 | D | 0.34 | neutral | None | None | None | None | I |
D/L | 0.5065 | ambiguous | 0.4033 | ambiguous | 0.258 | Stabilizing | 0.976 | D | 0.421 | neutral | None | None | None | None | I |
D/M | 0.6761 | likely_pathogenic | 0.5786 | pathogenic | 0.105 | Stabilizing | 0.999 | D | 0.487 | neutral | None | None | None | None | I |
D/N | 0.1043 | likely_benign | 0.09 | benign | 0.164 | Stabilizing | 0.896 | D | 0.383 | neutral | N | 0.492918635 | None | None | I |
D/P | 0.596 | likely_pathogenic | 0.468 | ambiguous | 0.188 | Stabilizing | 0.988 | D | 0.358 | neutral | None | None | None | None | I |
D/Q | 0.3412 | ambiguous | 0.2585 | benign | 0.185 | Stabilizing | 0.307 | N | 0.145 | neutral | None | None | None | None | I |
D/R | 0.412 | ambiguous | 0.3062 | benign | 0.651 | Stabilizing | 0.976 | D | 0.394 | neutral | None | None | None | None | I |
D/S | 0.1429 | likely_benign | 0.1131 | benign | 0.082 | Stabilizing | 0.919 | D | 0.303 | neutral | None | None | None | None | I |
D/T | 0.3156 | likely_benign | 0.24 | benign | 0.189 | Stabilizing | 0.919 | D | 0.373 | neutral | None | None | None | None | I |
D/V | 0.3857 | ambiguous | 0.2854 | benign | 0.188 | Stabilizing | 0.984 | D | 0.413 | neutral | N | 0.503271702 | None | None | I |
D/W | 0.8852 | likely_pathogenic | 0.8402 | pathogenic | -0.002 | Destabilizing | 0.999 | D | 0.596 | neutral | None | None | None | None | I |
D/Y | 0.3344 | likely_benign | 0.2615 | benign | 0.168 | Stabilizing | 0.995 | D | 0.485 | neutral | N | 0.461429787 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.