Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18753 | 56482;56483;56484 | chr2:178599644;178599643;178599642 | chr2:179464371;179464370;179464369 |
N2AB | 17112 | 51559;51560;51561 | chr2:178599644;178599643;178599642 | chr2:179464371;179464370;179464369 |
N2A | 16185 | 48778;48779;48780 | chr2:178599644;178599643;178599642 | chr2:179464371;179464370;179464369 |
N2B | 9688 | 29287;29288;29289 | chr2:178599644;178599643;178599642 | chr2:179464371;179464370;179464369 |
Novex-1 | 9813 | 29662;29663;29664 | chr2:178599644;178599643;178599642 | chr2:179464371;179464370;179464369 |
Novex-2 | 9880 | 29863;29864;29865 | chr2:178599644;178599643;178599642 | chr2:179464371;179464370;179464369 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/E | None | None | 0.4 | N | 0.199 | 0.158 | 0.119812018005 | gnomAD-4.0.0 | 1.59342E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43592E-05 | 0 |
Q/R | None | None | 0.98 | N | 0.491 | 0.27 | 0.154104182512 | gnomAD-4.0.0 | 1.59343E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43625E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2018 | likely_benign | 0.1954 | benign | -0.272 | Destabilizing | 0.985 | D | 0.481 | neutral | None | None | None | None | N |
Q/C | 0.6397 | likely_pathogenic | 0.6212 | pathogenic | 0.392 | Stabilizing | 1.0 | D | 0.597 | neutral | None | None | None | None | N |
Q/D | 0.2251 | likely_benign | 0.2242 | benign | -0.611 | Destabilizing | 0.971 | D | 0.471 | neutral | None | None | None | None | N |
Q/E | 0.0722 | likely_benign | 0.0738 | benign | -0.601 | Destabilizing | 0.4 | N | 0.199 | neutral | N | 0.44989579 | None | None | N |
Q/F | 0.6515 | likely_pathogenic | 0.6285 | pathogenic | -0.395 | Destabilizing | 0.998 | D | 0.543 | neutral | None | None | None | None | N |
Q/G | 0.2131 | likely_benign | 0.2073 | benign | -0.536 | Destabilizing | 0.993 | D | 0.487 | neutral | None | None | None | None | N |
Q/H | 0.2173 | likely_benign | 0.2071 | benign | -0.703 | Destabilizing | 0.265 | N | 0.299 | neutral | N | 0.480104054 | None | None | N |
Q/I | 0.4785 | ambiguous | 0.4676 | ambiguous | 0.355 | Stabilizing | 0.999 | D | 0.537 | neutral | None | None | None | None | N |
Q/K | 0.0978 | likely_benign | 0.095 | benign | -0.095 | Destabilizing | 0.98 | D | 0.509 | neutral | N | 0.432502108 | None | None | N |
Q/L | 0.1654 | likely_benign | 0.1635 | benign | 0.355 | Stabilizing | 0.99 | D | 0.451 | neutral | N | 0.470731723 | None | None | N |
Q/M | 0.371 | ambiguous | 0.3785 | ambiguous | 0.963 | Stabilizing | 0.999 | D | 0.435 | neutral | None | None | None | None | N |
Q/N | 0.1855 | likely_benign | 0.1848 | benign | -0.463 | Destabilizing | 0.985 | D | 0.461 | neutral | None | None | None | None | N |
Q/P | 0.3646 | ambiguous | 0.337 | benign | 0.177 | Stabilizing | 0.999 | D | 0.427 | neutral | N | 0.480834773 | None | None | N |
Q/R | 0.1114 | likely_benign | 0.1061 | benign | 0.023 | Stabilizing | 0.98 | D | 0.491 | neutral | N | 0.460555501 | None | None | N |
Q/S | 0.2029 | likely_benign | 0.1934 | benign | -0.431 | Destabilizing | 0.985 | D | 0.473 | neutral | None | None | None | None | N |
Q/T | 0.2173 | likely_benign | 0.2072 | benign | -0.258 | Destabilizing | 0.993 | D | 0.445 | neutral | None | None | None | None | N |
Q/V | 0.3095 | likely_benign | 0.296 | benign | 0.177 | Stabilizing | 0.998 | D | 0.428 | neutral | None | None | None | None | N |
Q/W | 0.6039 | likely_pathogenic | 0.5965 | pathogenic | -0.387 | Destabilizing | 1.0 | D | 0.577 | neutral | None | None | None | None | N |
Q/Y | 0.4163 | ambiguous | 0.3913 | ambiguous | -0.115 | Destabilizing | 0.996 | D | 0.45 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.