Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18761 | 56506;56507;56508 | chr2:178599620;178599619;178599618 | chr2:179464347;179464346;179464345 |
N2AB | 17120 | 51583;51584;51585 | chr2:178599620;178599619;178599618 | chr2:179464347;179464346;179464345 |
N2A | 16193 | 48802;48803;48804 | chr2:178599620;178599619;178599618 | chr2:179464347;179464346;179464345 |
N2B | 9696 | 29311;29312;29313 | chr2:178599620;178599619;178599618 | chr2:179464347;179464346;179464345 |
Novex-1 | 9821 | 29686;29687;29688 | chr2:178599620;178599619;178599618 | chr2:179464347;179464346;179464345 |
Novex-2 | 9888 | 29887;29888;29889 | chr2:178599620;178599619;178599618 | chr2:179464347;179464346;179464345 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.835 | N | 0.449 | 0.085 | 0.52122689477 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.3677 | ambiguous | 0.3638 | ambiguous | -2.53 | Highly Destabilizing | 0.97 | D | 0.613 | neutral | None | None | None | None | N |
L/C | 0.4801 | ambiguous | 0.4863 | ambiguous | -1.783 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
L/D | 0.7484 | likely_pathogenic | 0.7519 | pathogenic | -2.816 | Highly Destabilizing | 0.999 | D | 0.765 | deleterious | None | None | None | None | N |
L/E | 0.4901 | ambiguous | 0.4798 | ambiguous | -2.658 | Highly Destabilizing | 0.999 | D | 0.76 | deleterious | None | None | None | None | N |
L/F | 0.1618 | likely_benign | 0.163 | benign | -1.472 | Destabilizing | 0.989 | D | 0.637 | neutral | N | 0.515588504 | None | None | N |
L/G | 0.6762 | likely_pathogenic | 0.6837 | pathogenic | -2.998 | Highly Destabilizing | 0.996 | D | 0.756 | deleterious | None | None | None | None | N |
L/H | 0.279 | likely_benign | 0.2801 | benign | -2.345 | Highly Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
L/I | 0.0882 | likely_benign | 0.0882 | benign | -1.203 | Destabilizing | 0.248 | N | 0.23 | neutral | N | 0.451075666 | None | None | N |
L/K | 0.3413 | ambiguous | 0.3343 | benign | -1.888 | Destabilizing | 0.996 | D | 0.733 | prob.delet. | None | None | None | None | N |
L/M | 0.1285 | likely_benign | 0.1297 | benign | -1.148 | Destabilizing | 0.871 | D | 0.401 | neutral | None | None | None | None | N |
L/N | 0.402 | ambiguous | 0.3969 | ambiguous | -2.04 | Highly Destabilizing | 0.999 | D | 0.763 | deleterious | None | None | None | None | N |
L/P | 0.6347 | likely_pathogenic | 0.7175 | pathogenic | -1.625 | Destabilizing | 0.999 | D | 0.765 | deleterious | None | None | None | None | N |
L/Q | 0.2215 | likely_benign | 0.2147 | benign | -2.024 | Highly Destabilizing | 0.996 | D | 0.741 | deleterious | None | None | None | None | N |
L/R | 0.2698 | likely_benign | 0.2677 | benign | -1.458 | Destabilizing | 0.996 | D | 0.739 | prob.delet. | None | None | None | None | N |
L/S | 0.3846 | ambiguous | 0.3923 | ambiguous | -2.684 | Highly Destabilizing | 0.994 | D | 0.698 | prob.neutral | N | 0.494191725 | None | None | N |
L/T | 0.2552 | likely_benign | 0.2461 | benign | -2.406 | Highly Destabilizing | 0.996 | D | 0.659 | neutral | None | None | None | None | N |
L/V | 0.1077 | likely_benign | 0.1063 | benign | -1.625 | Destabilizing | 0.835 | D | 0.449 | neutral | N | 0.442629541 | None | None | N |
L/W | 0.3102 | likely_benign | 0.3233 | benign | -1.803 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
L/Y | 0.3525 | ambiguous | 0.3591 | ambiguous | -1.588 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.