Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18764 | 56515;56516;56517 | chr2:178599611;178599610;178599609 | chr2:179464338;179464337;179464336 |
N2AB | 17123 | 51592;51593;51594 | chr2:178599611;178599610;178599609 | chr2:179464338;179464337;179464336 |
N2A | 16196 | 48811;48812;48813 | chr2:178599611;178599610;178599609 | chr2:179464338;179464337;179464336 |
N2B | 9699 | 29320;29321;29322 | chr2:178599611;178599610;178599609 | chr2:179464338;179464337;179464336 |
Novex-1 | 9824 | 29695;29696;29697 | chr2:178599611;178599610;178599609 | chr2:179464338;179464337;179464336 |
Novex-2 | 9891 | 29896;29897;29898 | chr2:178599611;178599610;178599609 | chr2:179464338;179464337;179464336 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/N | None | None | 0.912 | N | 0.83 | 0.475 | 0.751848519796 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
I/V | None | None | 0.041 | N | 0.43 | 0.075 | 0.243398259712 | gnomAD-4.0.0 | 1.60411E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88893E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9048 | likely_pathogenic | 0.8797 | pathogenic | -2.579 | Highly Destabilizing | 0.207 | N | 0.693 | prob.neutral | None | None | None | None | N |
I/C | 0.9462 | likely_pathogenic | 0.9299 | pathogenic | -1.772 | Destabilizing | 0.981 | D | 0.765 | deleterious | None | None | None | None | N |
I/D | 0.9991 | likely_pathogenic | 0.9981 | pathogenic | -3.064 | Highly Destabilizing | 0.932 | D | 0.829 | deleterious | None | None | None | None | N |
I/E | 0.9963 | likely_pathogenic | 0.9934 | pathogenic | -2.797 | Highly Destabilizing | 0.818 | D | 0.816 | deleterious | None | None | None | None | N |
I/F | 0.6635 | likely_pathogenic | 0.57 | pathogenic | -1.53 | Destabilizing | 0.457 | N | 0.737 | prob.delet. | N | 0.507272012 | None | None | N |
I/G | 0.992 | likely_pathogenic | 0.9872 | pathogenic | -3.164 | Highly Destabilizing | 0.818 | D | 0.813 | deleterious | None | None | None | None | N |
I/H | 0.996 | likely_pathogenic | 0.9915 | pathogenic | -2.732 | Highly Destabilizing | 0.981 | D | 0.835 | deleterious | None | None | None | None | N |
I/K | 0.9926 | likely_pathogenic | 0.9867 | pathogenic | -1.923 | Destabilizing | 0.818 | D | 0.807 | deleterious | None | None | None | None | N |
I/L | 0.097 | likely_benign | 0.0926 | benign | -0.864 | Destabilizing | None | N | 0.348 | neutral | N | 0.389175405 | None | None | N |
I/M | 0.2053 | likely_benign | 0.1835 | benign | -0.824 | Destabilizing | 0.627 | D | 0.699 | prob.neutral | N | 0.489379685 | None | None | N |
I/N | 0.9885 | likely_pathogenic | 0.977 | pathogenic | -2.394 | Highly Destabilizing | 0.912 | D | 0.83 | deleterious | N | 0.508312162 | None | None | N |
I/P | 0.9963 | likely_pathogenic | 0.9937 | pathogenic | -1.42 | Destabilizing | 0.932 | D | 0.829 | deleterious | None | None | None | None | N |
I/Q | 0.9924 | likely_pathogenic | 0.9859 | pathogenic | -2.179 | Highly Destabilizing | 0.932 | D | 0.833 | deleterious | None | None | None | None | N |
I/R | 0.9901 | likely_pathogenic | 0.9818 | pathogenic | -1.767 | Destabilizing | 0.818 | D | 0.828 | deleterious | None | None | None | None | N |
I/S | 0.9828 | likely_pathogenic | 0.9678 | pathogenic | -3.064 | Highly Destabilizing | 0.773 | D | 0.769 | deleterious | N | 0.508138804 | None | None | N |
I/T | 0.9586 | likely_pathogenic | 0.9376 | pathogenic | -2.644 | Highly Destabilizing | 0.324 | N | 0.7 | prob.neutral | N | 0.507965446 | None | None | N |
I/V | 0.0963 | likely_benign | 0.0946 | benign | -1.42 | Destabilizing | 0.041 | N | 0.43 | neutral | N | 0.381286641 | None | None | N |
I/W | 0.9939 | likely_pathogenic | 0.9882 | pathogenic | -1.998 | Destabilizing | 0.981 | D | 0.831 | deleterious | None | None | None | None | N |
I/Y | 0.9781 | likely_pathogenic | 0.9578 | pathogenic | -1.692 | Destabilizing | 0.818 | D | 0.76 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.