Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18767 | 56524;56525;56526 | chr2:178599602;178599601;178599600 | chr2:179464329;179464328;179464327 |
N2AB | 17126 | 51601;51602;51603 | chr2:178599602;178599601;178599600 | chr2:179464329;179464328;179464327 |
N2A | 16199 | 48820;48821;48822 | chr2:178599602;178599601;178599600 | chr2:179464329;179464328;179464327 |
N2B | 9702 | 29329;29330;29331 | chr2:178599602;178599601;178599600 | chr2:179464329;179464328;179464327 |
Novex-1 | 9827 | 29704;29705;29706 | chr2:178599602;178599601;178599600 | chr2:179464329;179464328;179464327 |
Novex-2 | 9894 | 29905;29906;29907 | chr2:178599602;178599601;178599600 | chr2:179464329;179464328;179464327 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1275550493 | -0.287 | 0.081 | N | 0.334 | 0.09 | 0.528409864224 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 6.51042E-04 | None | 0 | None | 0 | 0 | 0 |
V/I | rs1275550493 | -0.287 | 0.081 | N | 0.334 | 0.09 | 0.528409864224 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 1.93949E-04 | None | 0 | 0 | 0 | 0 | 0 |
V/I | rs1275550493 | -0.287 | 0.081 | N | 0.334 | 0.09 | 0.528409864224 | gnomAD-4.0.0 | 2.03024E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.13817E-04 | None | 0 | 0 | 1.20501E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1203 | likely_benign | 0.1189 | benign | -0.823 | Destabilizing | None | N | 0.125 | neutral | N | 0.460772584 | None | None | I |
V/C | 0.5996 | likely_pathogenic | 0.6367 | pathogenic | -0.674 | Destabilizing | 0.883 | D | 0.501 | neutral | None | None | None | None | I |
V/D | 0.2987 | likely_benign | 0.2781 | benign | -0.686 | Destabilizing | 0.124 | N | 0.581 | neutral | None | None | None | None | I |
V/E | 0.1522 | likely_benign | 0.1473 | benign | -0.8 | Destabilizing | None | N | 0.275 | neutral | N | 0.443936263 | None | None | I |
V/F | 0.1735 | likely_benign | 0.1754 | benign | -1.111 | Destabilizing | 0.667 | D | 0.511 | neutral | None | None | None | None | I |
V/G | 0.2042 | likely_benign | 0.1949 | benign | -0.977 | Destabilizing | 0.042 | N | 0.596 | neutral | N | 0.49332772 | None | None | I |
V/H | 0.3869 | ambiguous | 0.4197 | ambiguous | -0.604 | Destabilizing | 0.667 | D | 0.578 | neutral | None | None | None | None | I |
V/I | 0.0722 | likely_benign | 0.0742 | benign | -0.557 | Destabilizing | 0.081 | N | 0.334 | neutral | N | 0.462159451 | None | None | I |
V/K | 0.171 | likely_benign | 0.1733 | benign | -0.557 | Destabilizing | 0.124 | N | 0.552 | neutral | None | None | None | None | I |
V/L | 0.1654 | likely_benign | 0.1801 | benign | -0.557 | Destabilizing | 0.042 | N | 0.355 | neutral | N | 0.521743685 | None | None | I |
V/M | 0.103 | likely_benign | 0.1078 | benign | -0.335 | Destabilizing | 0.859 | D | 0.461 | neutral | None | None | None | None | I |
V/N | 0.1914 | likely_benign | 0.1945 | benign | -0.284 | Destabilizing | 0.22 | N | 0.614 | neutral | None | None | None | None | I |
V/P | 0.9507 | likely_pathogenic | 0.9201 | pathogenic | -0.611 | Destabilizing | 0.364 | N | 0.572 | neutral | None | None | None | None | I |
V/Q | 0.1637 | likely_benign | 0.17 | benign | -0.604 | Destabilizing | 0.124 | N | 0.571 | neutral | None | None | None | None | I |
V/R | 0.1971 | likely_benign | 0.2027 | benign | -0.004 | Destabilizing | 0.22 | N | 0.595 | neutral | None | None | None | None | I |
V/S | 0.1301 | likely_benign | 0.1325 | benign | -0.662 | Destabilizing | 0.005 | N | 0.275 | neutral | None | None | None | None | I |
V/T | 0.0984 | likely_benign | 0.0967 | benign | -0.683 | Destabilizing | 0.004 | N | 0.133 | neutral | None | None | None | None | I |
V/W | 0.7811 | likely_pathogenic | 0.7895 | pathogenic | -1.169 | Destabilizing | 0.958 | D | 0.611 | neutral | None | None | None | None | I |
V/Y | 0.4818 | ambiguous | 0.5069 | ambiguous | -0.851 | Destabilizing | 0.859 | D | 0.511 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.