Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18769 | 56530;56531;56532 | chr2:178599596;178599595;178599594 | chr2:179464323;179464322;179464321 |
N2AB | 17128 | 51607;51608;51609 | chr2:178599596;178599595;178599594 | chr2:179464323;179464322;179464321 |
N2A | 16201 | 48826;48827;48828 | chr2:178599596;178599595;178599594 | chr2:179464323;179464322;179464321 |
N2B | 9704 | 29335;29336;29337 | chr2:178599596;178599595;178599594 | chr2:179464323;179464322;179464321 |
Novex-1 | 9829 | 29710;29711;29712 | chr2:178599596;178599595;178599594 | chr2:179464323;179464322;179464321 |
Novex-2 | 9896 | 29911;29912;29913 | chr2:178599596;178599595;178599594 | chr2:179464323;179464322;179464321 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | None | None | 0.961 | N | 0.432 | 0.29 | 0.280987212366 | gnomAD-4.0.0 | 1.62984E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.92642E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1645 | likely_benign | 0.1454 | benign | -0.093 | Destabilizing | 0.871 | D | 0.415 | neutral | None | None | None | None | I |
N/C | 0.2508 | likely_benign | 0.2207 | benign | 0.154 | Stabilizing | 1.0 | D | 0.545 | neutral | None | None | None | None | I |
N/D | 0.1524 | likely_benign | 0.1153 | benign | 0.079 | Stabilizing | 0.961 | D | 0.432 | neutral | N | 0.427449445 | None | None | I |
N/E | 0.3892 | ambiguous | 0.2925 | benign | 0.016 | Stabilizing | 0.97 | D | 0.371 | neutral | None | None | None | None | I |
N/F | 0.5193 | ambiguous | 0.457 | ambiguous | -0.705 | Destabilizing | 0.999 | D | 0.54 | neutral | None | None | None | None | I |
N/G | 0.2341 | likely_benign | 0.2021 | benign | -0.184 | Destabilizing | 0.931 | D | 0.435 | neutral | None | None | None | None | I |
N/H | 0.0981 | likely_benign | 0.0905 | benign | -0.213 | Destabilizing | 0.998 | D | 0.417 | neutral | N | 0.451481098 | None | None | I |
N/I | 0.1746 | likely_benign | 0.1544 | benign | 0.045 | Stabilizing | 0.994 | D | 0.531 | neutral | N | 0.435684926 | None | None | I |
N/K | 0.3139 | likely_benign | 0.2366 | benign | 0.109 | Stabilizing | 0.961 | D | 0.373 | neutral | N | 0.418693889 | None | None | I |
N/L | 0.2061 | likely_benign | 0.1843 | benign | 0.045 | Stabilizing | 0.985 | D | 0.439 | neutral | None | None | None | None | I |
N/M | 0.3103 | likely_benign | 0.2886 | benign | 0.114 | Stabilizing | 1.0 | D | 0.528 | neutral | None | None | None | None | I |
N/P | 0.3407 | ambiguous | 0.2834 | benign | 0.022 | Stabilizing | 0.996 | D | 0.495 | neutral | None | None | None | None | I |
N/Q | 0.3056 | likely_benign | 0.2574 | benign | -0.275 | Destabilizing | 0.996 | D | 0.384 | neutral | None | None | None | None | I |
N/R | 0.3429 | ambiguous | 0.2637 | benign | 0.172 | Stabilizing | 0.996 | D | 0.367 | neutral | None | None | None | None | I |
N/S | 0.0669 | likely_benign | 0.0647 | benign | -0.042 | Destabilizing | 0.118 | N | 0.187 | neutral | N | 0.349639235 | None | None | I |
N/T | 0.0977 | likely_benign | 0.0911 | benign | 0.007 | Stabilizing | 0.835 | D | 0.393 | neutral | N | 0.404553942 | None | None | I |
N/V | 0.1788 | likely_benign | 0.1625 | benign | 0.022 | Stabilizing | 0.996 | D | 0.465 | neutral | None | None | None | None | I |
N/W | 0.7921 | likely_pathogenic | 0.7342 | pathogenic | -0.843 | Destabilizing | 1.0 | D | 0.638 | neutral | None | None | None | None | I |
N/Y | 0.1853 | likely_benign | 0.1572 | benign | -0.514 | Destabilizing | 0.998 | D | 0.527 | neutral | N | 0.451481098 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.