Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18773 | 56542;56543;56544 | chr2:178599584;178599583;178599582 | chr2:179464311;179464310;179464309 |
N2AB | 17132 | 51619;51620;51621 | chr2:178599584;178599583;178599582 | chr2:179464311;179464310;179464309 |
N2A | 16205 | 48838;48839;48840 | chr2:178599584;178599583;178599582 | chr2:179464311;179464310;179464309 |
N2B | 9708 | 29347;29348;29349 | chr2:178599584;178599583;178599582 | chr2:179464311;179464310;179464309 |
Novex-1 | 9833 | 29722;29723;29724 | chr2:178599584;178599583;178599582 | chr2:179464311;179464310;179464309 |
Novex-2 | 9900 | 29923;29924;29925 | chr2:178599584;178599583;178599582 | chr2:179464311;179464310;179464309 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.939 | N | 0.549 | 0.414 | 0.444807159249 | gnomAD-4.0.0 | 1.64746E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.5223E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4757 | ambiguous | 0.4352 | ambiguous | -0.846 | Destabilizing | 0.999 | D | 0.625 | neutral | None | None | None | None | I |
A/D | 0.2317 | likely_benign | 0.1551 | benign | -0.404 | Destabilizing | 0.128 | N | 0.461 | neutral | None | None | None | None | I |
A/E | 0.3109 | likely_benign | 0.2352 | benign | -0.548 | Destabilizing | 0.885 | D | 0.592 | neutral | N | 0.520957039 | None | None | I |
A/F | 0.4765 | ambiguous | 0.4047 | ambiguous | -0.9 | Destabilizing | 0.993 | D | 0.771 | deleterious | None | None | None | None | I |
A/G | 0.261 | likely_benign | 0.21 | benign | -0.394 | Destabilizing | 0.939 | D | 0.515 | neutral | N | 0.513284147 | None | None | I |
A/H | 0.5645 | likely_pathogenic | 0.4745 | ambiguous | -0.414 | Destabilizing | 0.999 | D | 0.759 | deleterious | None | None | None | None | I |
A/I | 0.2211 | likely_benign | 0.2 | benign | -0.371 | Destabilizing | 0.91 | D | 0.595 | neutral | None | None | None | None | I |
A/K | 0.5504 | ambiguous | 0.4556 | ambiguous | -0.662 | Destabilizing | 0.986 | D | 0.605 | neutral | None | None | None | None | I |
A/L | 0.2784 | likely_benign | 0.2406 | benign | -0.371 | Destabilizing | 0.91 | D | 0.549 | neutral | None | None | None | None | I |
A/M | 0.281 | likely_benign | 0.2565 | benign | -0.455 | Destabilizing | 0.998 | D | 0.661 | neutral | None | None | None | None | I |
A/N | 0.3065 | likely_benign | 0.2342 | benign | -0.401 | Destabilizing | 0.973 | D | 0.759 | deleterious | None | None | None | None | I |
A/P | 0.9769 | likely_pathogenic | 0.9469 | pathogenic | -0.325 | Destabilizing | 0.991 | D | 0.67 | neutral | N | 0.495597966 | None | None | I |
A/Q | 0.4094 | ambiguous | 0.3403 | ambiguous | -0.656 | Destabilizing | 0.993 | D | 0.666 | neutral | None | None | None | None | I |
A/R | 0.5417 | ambiguous | 0.4404 | ambiguous | -0.223 | Destabilizing | 0.993 | D | 0.661 | neutral | None | None | None | None | I |
A/S | 0.105 | likely_benign | 0.093 | benign | -0.616 | Destabilizing | 0.939 | D | 0.525 | neutral | N | 0.507739812 | None | None | I |
A/T | 0.0818 | likely_benign | 0.0761 | benign | -0.675 | Destabilizing | 0.939 | D | 0.549 | neutral | N | 0.519476958 | None | None | I |
A/V | 0.1085 | likely_benign | 0.103 | benign | -0.325 | Destabilizing | 0.17 | N | 0.263 | neutral | N | 0.458580428 | None | None | I |
A/W | 0.8929 | likely_pathogenic | 0.8361 | pathogenic | -1.042 | Destabilizing | 0.999 | D | 0.752 | deleterious | None | None | None | None | I |
A/Y | 0.6041 | likely_pathogenic | 0.4991 | ambiguous | -0.693 | Destabilizing | 0.998 | D | 0.77 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.