Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18776 | 56551;56552;56553 | chr2:178599575;178599574;178599573 | chr2:179464302;179464301;179464300 |
N2AB | 17135 | 51628;51629;51630 | chr2:178599575;178599574;178599573 | chr2:179464302;179464301;179464300 |
N2A | 16208 | 48847;48848;48849 | chr2:178599575;178599574;178599573 | chr2:179464302;179464301;179464300 |
N2B | 9711 | 29356;29357;29358 | chr2:178599575;178599574;178599573 | chr2:179464302;179464301;179464300 |
Novex-1 | 9836 | 29731;29732;29733 | chr2:178599575;178599574;178599573 | chr2:179464302;179464301;179464300 |
Novex-2 | 9903 | 29932;29933;29934 | chr2:178599575;178599574;178599573 | chr2:179464302;179464301;179464300 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs987030753 | None | 0.92 | N | 0.479 | 0.25 | 0.319114376414 | gnomAD-4.0.0 | 1.65905E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.54226E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2642 | likely_benign | 0.2311 | benign | -0.587 | Destabilizing | 0.134 | N | 0.23 | neutral | N | 0.503814073 | None | None | I |
E/C | 0.9253 | likely_pathogenic | 0.9099 | pathogenic | -0.297 | Destabilizing | 0.999 | D | 0.641 | neutral | None | None | None | None | I |
E/D | 0.2473 | likely_benign | 0.1931 | benign | -0.861 | Destabilizing | 0.015 | N | 0.161 | neutral | N | 0.464218321 | None | None | I |
E/F | 0.921 | likely_pathogenic | 0.9005 | pathogenic | -0.069 | Destabilizing | 0.997 | D | 0.656 | neutral | None | None | None | None | I |
E/G | 0.359 | ambiguous | 0.2877 | benign | -0.921 | Destabilizing | 0.826 | D | 0.569 | neutral | D | 0.528653802 | None | None | I |
E/H | 0.7692 | likely_pathogenic | 0.7112 | pathogenic | -0.209 | Destabilizing | 0.997 | D | 0.607 | neutral | None | None | None | None | I |
E/I | 0.5595 | ambiguous | 0.5169 | ambiguous | 0.308 | Stabilizing | 0.991 | D | 0.68 | prob.neutral | None | None | None | None | I |
E/K | 0.4101 | ambiguous | 0.3314 | benign | -0.232 | Destabilizing | 0.92 | D | 0.479 | neutral | N | 0.494365083 | None | None | I |
E/L | 0.6981 | likely_pathogenic | 0.6455 | pathogenic | 0.308 | Stabilizing | 0.939 | D | 0.675 | prob.neutral | None | None | None | None | I |
E/M | 0.6528 | likely_pathogenic | 0.6114 | pathogenic | 0.563 | Stabilizing | 0.999 | D | 0.633 | neutral | None | None | None | None | I |
E/N | 0.4799 | ambiguous | 0.4047 | ambiguous | -0.756 | Destabilizing | 0.939 | D | 0.506 | neutral | None | None | None | None | I |
E/P | 0.7502 | likely_pathogenic | 0.6725 | pathogenic | 0.032 | Stabilizing | 0.991 | D | 0.651 | neutral | None | None | None | None | I |
E/Q | 0.255 | likely_benign | 0.2178 | benign | -0.625 | Destabilizing | 0.959 | D | 0.555 | neutral | N | 0.495984023 | None | None | I |
E/R | 0.6258 | likely_pathogenic | 0.5324 | ambiguous | 0.049 | Stabilizing | 0.991 | D | 0.597 | neutral | None | None | None | None | I |
E/S | 0.3682 | ambiguous | 0.3043 | benign | -0.984 | Destabilizing | 0.2 | N | 0.151 | neutral | None | None | None | None | I |
E/T | 0.334 | likely_benign | 0.273 | benign | -0.706 | Destabilizing | 0.884 | D | 0.551 | neutral | None | None | None | None | I |
E/V | 0.333 | likely_benign | 0.2984 | benign | 0.032 | Stabilizing | 0.92 | D | 0.667 | neutral | N | 0.511857553 | None | None | I |
E/W | 0.974 | likely_pathogenic | 0.964 | pathogenic | 0.166 | Stabilizing | 0.999 | D | 0.693 | prob.neutral | None | None | None | None | I |
E/Y | 0.8449 | likely_pathogenic | 0.8038 | pathogenic | 0.184 | Stabilizing | 0.997 | D | 0.645 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.