Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18777 | 56554;56555;56556 | chr2:178599572;178599571;178599570 | chr2:179464299;179464298;179464297 |
N2AB | 17136 | 51631;51632;51633 | chr2:178599572;178599571;178599570 | chr2:179464299;179464298;179464297 |
N2A | 16209 | 48850;48851;48852 | chr2:178599572;178599571;178599570 | chr2:179464299;179464298;179464297 |
N2B | 9712 | 29359;29360;29361 | chr2:178599572;178599571;178599570 | chr2:179464299;179464298;179464297 |
Novex-1 | 9837 | 29734;29735;29736 | chr2:178599572;178599571;178599570 | chr2:179464299;179464298;179464297 |
Novex-2 | 9904 | 29935;29936;29937 | chr2:178599572;178599571;178599570 | chr2:179464299;179464298;179464297 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/L | rs1369067866 | -0.714 | 0.166 | N | 0.187 | 0.179 | 0.314716216878 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 1.14732E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
M/L | rs1369067866 | -0.714 | 0.166 | N | 0.187 | 0.179 | 0.314716216878 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
M/L | rs1369067866 | -0.714 | 0.166 | N | 0.187 | 0.179 | 0.314716216878 | gnomAD-4.0.0 | 6.57626E-06 | None | None | None | None | N | None | 2.41418E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.8478 | likely_pathogenic | 0.7817 | pathogenic | -2.341 | Highly Destabilizing | 0.55 | D | 0.558 | neutral | None | None | None | None | N |
M/C | 0.8584 | likely_pathogenic | 0.8103 | pathogenic | -2.613 | Highly Destabilizing | 0.993 | D | 0.713 | prob.delet. | None | None | None | None | N |
M/D | 0.9973 | likely_pathogenic | 0.9954 | pathogenic | -2.26 | Highly Destabilizing | 0.932 | D | 0.769 | deleterious | None | None | None | None | N |
M/E | 0.9773 | likely_pathogenic | 0.961 | pathogenic | -2.005 | Highly Destabilizing | 0.932 | D | 0.7 | prob.neutral | None | None | None | None | N |
M/F | 0.6608 | likely_pathogenic | 0.6354 | pathogenic | -0.748 | Destabilizing | 0.932 | D | 0.602 | neutral | None | None | None | None | N |
M/G | 0.9624 | likely_pathogenic | 0.9299 | pathogenic | -2.848 | Highly Destabilizing | 0.932 | D | 0.711 | prob.delet. | None | None | None | None | N |
M/H | 0.9797 | likely_pathogenic | 0.9655 | pathogenic | -2.493 | Highly Destabilizing | 0.993 | D | 0.711 | prob.delet. | None | None | None | None | N |
M/I | 0.5076 | ambiguous | 0.4505 | ambiguous | -0.874 | Destabilizing | 0.01 | N | 0.117 | neutral | N | 0.379386139 | None | None | N |
M/K | 0.919 | likely_pathogenic | 0.8709 | pathogenic | -1.707 | Destabilizing | 0.912 | D | 0.664 | neutral | N | 0.485123352 | None | None | N |
M/L | 0.2773 | likely_benign | 0.2421 | benign | -0.874 | Destabilizing | 0.166 | N | 0.187 | neutral | N | 0.457825493 | None | None | N |
M/N | 0.9679 | likely_pathogenic | 0.9499 | pathogenic | -2.143 | Highly Destabilizing | 0.932 | D | 0.749 | deleterious | None | None | None | None | N |
M/P | 0.9973 | likely_pathogenic | 0.9949 | pathogenic | -1.347 | Destabilizing | 0.977 | D | 0.764 | deleterious | None | None | None | None | N |
M/Q | 0.889 | likely_pathogenic | 0.8248 | pathogenic | -1.783 | Destabilizing | 0.993 | D | 0.667 | neutral | None | None | None | None | N |
M/R | 0.9373 | likely_pathogenic | 0.8902 | pathogenic | -1.795 | Destabilizing | 0.912 | D | 0.739 | prob.delet. | N | 0.503832715 | None | None | N |
M/S | 0.9403 | likely_pathogenic | 0.9031 | pathogenic | -2.702 | Highly Destabilizing | 0.584 | D | 0.635 | neutral | None | None | None | None | N |
M/T | 0.8243 | likely_pathogenic | 0.7402 | pathogenic | -2.315 | Highly Destabilizing | 0.028 | N | 0.347 | neutral | N | 0.443533618 | None | None | N |
M/V | 0.2094 | likely_benign | 0.1775 | benign | -1.347 | Destabilizing | 0.166 | N | 0.343 | neutral | N | 0.415613511 | None | None | N |
M/W | 0.9678 | likely_pathogenic | 0.9493 | pathogenic | -1.12 | Destabilizing | 0.998 | D | 0.687 | prob.neutral | None | None | None | None | N |
M/Y | 0.934 | likely_pathogenic | 0.9073 | pathogenic | -1.11 | Destabilizing | 0.993 | D | 0.748 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.