Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18794 | 56605;56606;56607 | chr2:178599413;178599412;178599411 | chr2:179464140;179464139;179464138 |
N2AB | 17153 | 51682;51683;51684 | chr2:178599413;178599412;178599411 | chr2:179464140;179464139;179464138 |
N2A | 16226 | 48901;48902;48903 | chr2:178599413;178599412;178599411 | chr2:179464140;179464139;179464138 |
N2B | 9729 | 29410;29411;29412 | chr2:178599413;178599412;178599411 | chr2:179464140;179464139;179464138 |
Novex-1 | 9854 | 29785;29786;29787 | chr2:178599413;178599412;178599411 | chr2:179464140;179464139;179464138 |
Novex-2 | 9921 | 29986;29987;29988 | chr2:178599413;178599412;178599411 | chr2:179464140;179464139;179464138 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/V | rs757869355 | -1.747 | 0.698 | N | 0.615 | 0.314 | 0.435371449458 | gnomAD-2.1.1 | 4.94E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 5.04E-05 | None | 0 | 0 | 0 |
F/Y | rs750336579 | -0.614 | 0.966 | N | 0.637 | 0.312 | 0.424549175451 | gnomAD-2.1.1 | 4.92E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 5.01E-05 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.8502 | likely_pathogenic | 0.8072 | pathogenic | -2.42 | Highly Destabilizing | 0.754 | D | 0.659 | neutral | None | None | None | None | N |
F/C | 0.7095 | likely_pathogenic | 0.6667 | pathogenic | -1.494 | Destabilizing | 0.997 | D | 0.761 | deleterious | N | 0.500743977 | None | None | N |
F/D | 0.9838 | likely_pathogenic | 0.9762 | pathogenic | -1.016 | Destabilizing | 0.956 | D | 0.794 | deleterious | None | None | None | None | N |
F/E | 0.9782 | likely_pathogenic | 0.968 | pathogenic | -0.903 | Destabilizing | 0.956 | D | 0.784 | deleterious | None | None | None | None | N |
F/G | 0.9553 | likely_pathogenic | 0.9389 | pathogenic | -2.79 | Highly Destabilizing | 0.754 | D | 0.756 | deleterious | None | None | None | None | N |
F/H | 0.9192 | likely_pathogenic | 0.8919 | pathogenic | -0.946 | Destabilizing | 0.998 | D | 0.699 | prob.neutral | None | None | None | None | N |
F/I | 0.3073 | likely_benign | 0.2701 | benign | -1.292 | Destabilizing | 0.058 | N | 0.398 | neutral | N | 0.428379659 | None | None | N |
F/K | 0.9592 | likely_pathogenic | 0.9315 | pathogenic | -1.523 | Destabilizing | 0.956 | D | 0.791 | deleterious | None | None | None | None | N |
F/L | 0.9102 | likely_pathogenic | 0.8908 | pathogenic | -1.292 | Destabilizing | 0.489 | N | 0.517 | neutral | N | 0.462761592 | None | None | N |
F/M | 0.6021 | likely_pathogenic | 0.5512 | ambiguous | -1.042 | Destabilizing | 0.978 | D | 0.589 | neutral | None | None | None | None | N |
F/N | 0.9418 | likely_pathogenic | 0.9181 | pathogenic | -1.603 | Destabilizing | 0.956 | D | 0.8 | deleterious | None | None | None | None | N |
F/P | 0.9766 | likely_pathogenic | 0.9677 | pathogenic | -1.664 | Destabilizing | 0.978 | D | 0.809 | deleterious | None | None | None | None | N |
F/Q | 0.9564 | likely_pathogenic | 0.9362 | pathogenic | -1.635 | Destabilizing | 0.956 | D | 0.805 | deleterious | None | None | None | None | N |
F/R | 0.9333 | likely_pathogenic | 0.9005 | pathogenic | -0.86 | Destabilizing | 0.956 | D | 0.817 | deleterious | None | None | None | None | N |
F/S | 0.8855 | likely_pathogenic | 0.8477 | pathogenic | -2.479 | Highly Destabilizing | 0.058 | N | 0.465 | neutral | N | 0.485678059 | None | None | N |
F/T | 0.8337 | likely_pathogenic | 0.7797 | pathogenic | -2.262 | Highly Destabilizing | 0.754 | D | 0.734 | prob.delet. | None | None | None | None | N |
F/V | 0.4198 | ambiguous | 0.3697 | ambiguous | -1.664 | Destabilizing | 0.698 | D | 0.615 | neutral | N | 0.425797927 | None | None | N |
F/W | 0.6063 | likely_pathogenic | 0.5817 | pathogenic | -0.37 | Destabilizing | 0.998 | D | 0.603 | neutral | None | None | None | None | N |
F/Y | 0.3326 | likely_benign | 0.2996 | benign | -0.681 | Destabilizing | 0.966 | D | 0.637 | neutral | N | 0.502802847 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.