Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18798 | 56617;56618;56619 | chr2:178599401;178599400;178599399 | chr2:179464128;179464127;179464126 |
N2AB | 17157 | 51694;51695;51696 | chr2:178599401;178599400;178599399 | chr2:179464128;179464127;179464126 |
N2A | 16230 | 48913;48914;48915 | chr2:178599401;178599400;178599399 | chr2:179464128;179464127;179464126 |
N2B | 9733 | 29422;29423;29424 | chr2:178599401;178599400;178599399 | chr2:179464128;179464127;179464126 |
Novex-1 | 9858 | 29797;29798;29799 | chr2:178599401;178599400;178599399 | chr2:179464128;179464127;179464126 |
Novex-2 | 9925 | 29998;29999;30000 | chr2:178599401;178599400;178599399 | chr2:179464128;179464127;179464126 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | rs2052673581 | None | 0.001 | N | 0.14 | 0.167 | 0.359557344763 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
S/L | rs2052673581 | None | 0.001 | N | 0.14 | 0.167 | 0.359557344763 | gnomAD-4.0.0 | 6.57678E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47067E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1 | likely_benign | 0.1059 | benign | -0.404 | Destabilizing | 0.08 | N | 0.273 | neutral | N | 0.469324992 | None | None | N |
S/C | 0.1251 | likely_benign | 0.1332 | benign | -0.515 | Destabilizing | 0.965 | D | 0.349 | neutral | None | None | None | None | N |
S/D | 0.4499 | ambiguous | 0.5358 | ambiguous | -1.337 | Destabilizing | 0.561 | D | 0.266 | neutral | None | None | None | None | N |
S/E | 0.5908 | likely_pathogenic | 0.6497 | pathogenic | -1.323 | Destabilizing | 0.561 | D | 0.225 | neutral | None | None | None | None | N |
S/F | 0.2069 | likely_benign | 0.237 | benign | -0.628 | Destabilizing | 0.002 | N | 0.142 | neutral | None | None | None | None | N |
S/G | 0.1008 | likely_benign | 0.1173 | benign | -0.659 | Destabilizing | 0.345 | N | 0.221 | neutral | None | None | None | None | N |
S/H | 0.3207 | likely_benign | 0.3547 | ambiguous | -1.27 | Destabilizing | 0.965 | D | 0.343 | neutral | None | None | None | None | N |
S/I | 0.2634 | likely_benign | 0.3152 | benign | 0.164 | Stabilizing | 0.209 | N | 0.313 | neutral | None | None | None | None | N |
S/K | 0.6165 | likely_pathogenic | 0.6784 | pathogenic | -0.839 | Destabilizing | 0.561 | D | 0.231 | neutral | None | None | None | None | N |
S/L | 0.1128 | likely_benign | 0.1253 | benign | 0.164 | Stabilizing | 0.001 | N | 0.14 | neutral | N | 0.474250809 | None | None | N |
S/M | 0.1862 | likely_benign | 0.1991 | benign | 0.49 | Stabilizing | 0.047 | N | 0.235 | neutral | None | None | None | None | N |
S/N | 0.157 | likely_benign | 0.1873 | benign | -1.037 | Destabilizing | 0.561 | D | 0.278 | neutral | None | None | None | None | N |
S/P | 0.8801 | likely_pathogenic | 0.9293 | pathogenic | 0.009 | Stabilizing | 0.662 | D | 0.401 | neutral | N | 0.483982992 | None | None | N |
S/Q | 0.4741 | ambiguous | 0.5157 | ambiguous | -1.217 | Destabilizing | 0.722 | D | 0.347 | neutral | None | None | None | None | N |
S/R | 0.5295 | ambiguous | 0.6093 | pathogenic | -0.691 | Destabilizing | 0.561 | D | 0.407 | neutral | None | None | None | None | N |
S/T | 0.0733 | likely_benign | 0.0785 | benign | -0.829 | Destabilizing | 0.001 | N | 0.082 | neutral | N | 0.373678383 | None | None | N |
S/V | 0.2399 | likely_benign | 0.274 | benign | 0.009 | Stabilizing | 0.209 | N | 0.313 | neutral | None | None | None | None | N |
S/W | 0.3875 | ambiguous | 0.4455 | ambiguous | -0.744 | Destabilizing | 0.991 | D | 0.4 | neutral | None | None | None | None | N |
S/Y | 0.2158 | likely_benign | 0.2318 | benign | -0.405 | Destabilizing | 0.39 | N | 0.385 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.