Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1880 | 5863;5864;5865 | chr2:178776226;178776225;178776224 | chr2:179640953;179640952;179640951 |
N2AB | 1880 | 5863;5864;5865 | chr2:178776226;178776225;178776224 | chr2:179640953;179640952;179640951 |
N2A | 1880 | 5863;5864;5865 | chr2:178776226;178776225;178776224 | chr2:179640953;179640952;179640951 |
N2B | 1834 | 5725;5726;5727 | chr2:178776226;178776225;178776224 | chr2:179640953;179640952;179640951 |
Novex-1 | 1834 | 5725;5726;5727 | chr2:178776226;178776225;178776224 | chr2:179640953;179640952;179640951 |
Novex-2 | 1834 | 5725;5726;5727 | chr2:178776226;178776225;178776224 | chr2:179640953;179640952;179640951 |
Novex-3 | 1880 | 5863;5864;5865 | chr2:178776226;178776225;178776224 | chr2:179640953;179640952;179640951 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs2092208587 | None | 1.0 | D | 0.674 | 0.424 | 0.66962095848 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.562 | ambiguous | 0.5212 | ambiguous | -1.122 | Destabilizing | 0.999 | D | 0.657 | neutral | None | None | None | None | N |
L/C | 0.8466 | likely_pathogenic | 0.8188 | pathogenic | -0.693 | Destabilizing | 1.0 | D | 0.666 | neutral | None | None | None | None | N |
L/D | 0.9806 | likely_pathogenic | 0.9732 | pathogenic | -0.445 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
L/E | 0.827 | likely_pathogenic | 0.7891 | pathogenic | -0.458 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
L/F | 0.6228 | likely_pathogenic | 0.5476 | ambiguous | -0.729 | Destabilizing | 1.0 | D | 0.674 | neutral | D | 0.554717677 | None | None | N |
L/G | 0.9149 | likely_pathogenic | 0.8891 | pathogenic | -1.388 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
L/H | 0.7942 | likely_pathogenic | 0.7383 | pathogenic | -0.486 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | N | 0.510947883 | None | None | N |
L/I | 0.2328 | likely_benign | 0.1989 | benign | -0.489 | Destabilizing | 0.999 | D | 0.469 | neutral | N | 0.491553262 | None | None | N |
L/K | 0.738 | likely_pathogenic | 0.6771 | pathogenic | -0.694 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
L/M | 0.1907 | likely_benign | 0.1677 | benign | -0.523 | Destabilizing | 1.0 | D | 0.652 | neutral | None | None | None | None | N |
L/N | 0.8189 | likely_pathogenic | 0.7691 | pathogenic | -0.566 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
L/P | 0.6391 | likely_pathogenic | 0.6279 | pathogenic | -0.667 | Destabilizing | 1.0 | D | 0.752 | deleterious | N | 0.460136404 | None | None | N |
L/Q | 0.5147 | ambiguous | 0.4367 | ambiguous | -0.715 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | N |
L/R | 0.7601 | likely_pathogenic | 0.6977 | pathogenic | -0.139 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | N | 0.502918738 | None | None | N |
L/S | 0.8351 | likely_pathogenic | 0.7809 | pathogenic | -1.114 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
L/T | 0.6807 | likely_pathogenic | 0.6307 | pathogenic | -1.013 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
L/V | 0.2318 | likely_benign | 0.2098 | benign | -0.667 | Destabilizing | 0.999 | D | 0.519 | neutral | N | 0.50152078 | None | None | N |
L/W | 0.8567 | likely_pathogenic | 0.7958 | pathogenic | -0.784 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | N |
L/Y | 0.8512 | likely_pathogenic | 0.8095 | pathogenic | -0.549 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.