Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18801 | 56626;56627;56628 | chr2:178599392;178599391;178599390 | chr2:179464119;179464118;179464117 |
N2AB | 17160 | 51703;51704;51705 | chr2:178599392;178599391;178599390 | chr2:179464119;179464118;179464117 |
N2A | 16233 | 48922;48923;48924 | chr2:178599392;178599391;178599390 | chr2:179464119;179464118;179464117 |
N2B | 9736 | 29431;29432;29433 | chr2:178599392;178599391;178599390 | chr2:179464119;179464118;179464117 |
Novex-1 | 9861 | 29806;29807;29808 | chr2:178599392;178599391;178599390 | chr2:179464119;179464118;179464117 |
Novex-2 | 9928 | 30007;30008;30009 | chr2:178599392;178599391;178599390 | chr2:179464119;179464118;179464117 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | None | None | 0.003 | N | 0.153 | 0.065 | 0.141422826196 | gnomAD-4.0.0 | 6.96302E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.24614E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2327 | likely_benign | 0.253 | benign | -0.366 | Destabilizing | 0.2 | N | 0.272 | neutral | None | None | None | None | N |
Q/C | 0.4559 | ambiguous | 0.4469 | ambiguous | -0.11 | Destabilizing | 0.991 | D | 0.526 | neutral | None | None | None | None | N |
Q/D | 0.4864 | ambiguous | 0.5284 | ambiguous | -1.359 | Destabilizing | 0.111 | N | 0.227 | neutral | None | None | None | None | N |
Q/E | 0.1093 | likely_benign | 0.1136 | benign | -1.284 | Destabilizing | 0.001 | N | 0.085 | neutral | N | 0.413948925 | None | None | N |
Q/F | 0.5793 | likely_pathogenic | 0.5816 | pathogenic | -0.416 | Destabilizing | 0.908 | D | 0.625 | neutral | None | None | None | None | N |
Q/G | 0.2995 | likely_benign | 0.3168 | benign | -0.676 | Destabilizing | 0.111 | N | 0.306 | neutral | None | None | None | None | N |
Q/H | 0.1604 | likely_benign | 0.1693 | benign | -0.849 | Destabilizing | 0.003 | N | 0.153 | neutral | N | 0.421435044 | None | None | N |
Q/I | 0.4081 | ambiguous | 0.4312 | ambiguous | 0.402 | Stabilizing | 0.738 | D | 0.619 | neutral | None | None | None | None | N |
Q/K | 0.1102 | likely_benign | 0.1154 | benign | -0.227 | Destabilizing | 0.001 | N | 0.098 | neutral | N | 0.434862915 | None | None | N |
Q/L | 0.171 | likely_benign | 0.1798 | benign | 0.402 | Stabilizing | 0.302 | N | 0.359 | neutral | N | 0.52073246 | None | None | N |
Q/M | 0.295 | likely_benign | 0.309 | benign | 0.874 | Stabilizing | 0.968 | D | 0.434 | neutral | None | None | None | None | N |
Q/N | 0.2949 | likely_benign | 0.3006 | benign | -0.852 | Destabilizing | 0.001 | N | 0.067 | neutral | None | None | None | None | N |
Q/P | 0.9384 | likely_pathogenic | 0.9495 | pathogenic | 0.177 | Stabilizing | 0.68 | D | 0.511 | neutral | N | 0.52073246 | None | None | N |
Q/R | 0.1108 | likely_benign | 0.1154 | benign | -0.158 | Destabilizing | None | N | 0.062 | neutral | N | 0.399288903 | None | None | N |
Q/S | 0.2124 | likely_benign | 0.2174 | benign | -0.824 | Destabilizing | 0.111 | N | 0.215 | neutral | None | None | None | None | N |
Q/T | 0.1668 | likely_benign | 0.1776 | benign | -0.577 | Destabilizing | 0.365 | N | 0.363 | neutral | None | None | None | None | N |
Q/V | 0.2593 | likely_benign | 0.2778 | benign | 0.177 | Stabilizing | 0.738 | D | 0.473 | neutral | None | None | None | None | N |
Q/W | 0.5752 | likely_pathogenic | 0.6018 | pathogenic | -0.411 | Destabilizing | 0.991 | D | 0.545 | neutral | None | None | None | None | N |
Q/Y | 0.3705 | ambiguous | 0.3575 | ambiguous | -0.055 | Destabilizing | 0.582 | D | 0.586 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.