Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18804 | 56635;56636;56637 | chr2:178599383;178599382;178599381 | chr2:179464110;179464109;179464108 |
N2AB | 17163 | 51712;51713;51714 | chr2:178599383;178599382;178599381 | chr2:179464110;179464109;179464108 |
N2A | 16236 | 48931;48932;48933 | chr2:178599383;178599382;178599381 | chr2:179464110;179464109;179464108 |
N2B | 9739 | 29440;29441;29442 | chr2:178599383;178599382;178599381 | chr2:179464110;179464109;179464108 |
Novex-1 | 9864 | 29815;29816;29817 | chr2:178599383;178599382;178599381 | chr2:179464110;179464109;179464108 |
Novex-2 | 9931 | 30016;30017;30018 | chr2:178599383;178599382;178599381 | chr2:179464110;179464109;179464108 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 0.968 | D | 0.943 | 0.667 | 0.877731859371 | gnomAD-4.0.0 | 1.64312E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.54202E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8273 | likely_pathogenic | 0.7863 | pathogenic | -2.35 | Highly Destabilizing | 0.648 | D | 0.738 | prob.delet. | None | None | None | None | N |
L/C | 0.7727 | likely_pathogenic | 0.7184 | pathogenic | -1.382 | Destabilizing | 0.993 | D | 0.847 | deleterious | None | None | None | None | N |
L/D | 0.9989 | likely_pathogenic | 0.9982 | pathogenic | -2.936 | Highly Destabilizing | 0.929 | D | 0.935 | deleterious | None | None | None | None | N |
L/E | 0.9941 | likely_pathogenic | 0.9906 | pathogenic | -2.599 | Highly Destabilizing | 0.929 | D | 0.922 | deleterious | None | None | None | None | N |
L/F | 0.3438 | ambiguous | 0.3138 | benign | -1.405 | Destabilizing | 0.866 | D | 0.742 | deleterious | None | None | None | None | N |
L/G | 0.9817 | likely_pathogenic | 0.9728 | pathogenic | -2.955 | Highly Destabilizing | 0.929 | D | 0.918 | deleterious | None | None | None | None | N |
L/H | 0.9813 | likely_pathogenic | 0.9677 | pathogenic | -2.933 | Highly Destabilizing | 0.993 | D | 0.921 | deleterious | None | None | None | None | N |
L/I | 0.0745 | likely_benign | 0.0698 | benign | -0.512 | Destabilizing | 0.004 | N | 0.33 | neutral | N | 0.507771524 | None | None | N |
L/K | 0.9895 | likely_pathogenic | 0.9817 | pathogenic | -1.596 | Destabilizing | 0.929 | D | 0.911 | deleterious | None | None | None | None | N |
L/M | 0.1908 | likely_benign | 0.1712 | benign | -0.791 | Destabilizing | 0.866 | D | 0.724 | prob.delet. | None | None | None | None | N |
L/N | 0.9919 | likely_pathogenic | 0.986 | pathogenic | -2.387 | Highly Destabilizing | 0.976 | D | 0.944 | deleterious | None | None | None | None | N |
L/P | 0.9906 | likely_pathogenic | 0.9862 | pathogenic | -1.118 | Destabilizing | 0.968 | D | 0.943 | deleterious | D | 0.548488244 | None | None | N |
L/Q | 0.9777 | likely_pathogenic | 0.9632 | pathogenic | -1.921 | Destabilizing | 0.991 | D | 0.946 | deleterious | D | 0.548488244 | None | None | N |
L/R | 0.9799 | likely_pathogenic | 0.9646 | pathogenic | -1.979 | Destabilizing | 0.908 | D | 0.935 | deleterious | D | 0.548488244 | None | None | N |
L/S | 0.9794 | likely_pathogenic | 0.9679 | pathogenic | -2.819 | Highly Destabilizing | 0.929 | D | 0.911 | deleterious | None | None | None | None | N |
L/T | 0.9206 | likely_pathogenic | 0.8934 | pathogenic | -2.309 | Highly Destabilizing | 0.866 | D | 0.812 | deleterious | None | None | None | None | N |
L/V | 0.1015 | likely_benign | 0.0935 | benign | -1.118 | Destabilizing | 0.09 | N | 0.661 | neutral | N | 0.500957408 | None | None | N |
L/W | 0.9333 | likely_pathogenic | 0.9062 | pathogenic | -1.736 | Destabilizing | 0.993 | D | 0.888 | deleterious | None | None | None | None | N |
L/Y | 0.9143 | likely_pathogenic | 0.8813 | pathogenic | -1.566 | Destabilizing | 0.929 | D | 0.847 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.