Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18806 | 56641;56642;56643 | chr2:178599377;178599376;178599375 | chr2:179464104;179464103;179464102 |
N2AB | 17165 | 51718;51719;51720 | chr2:178599377;178599376;178599375 | chr2:179464104;179464103;179464102 |
N2A | 16238 | 48937;48938;48939 | chr2:178599377;178599376;178599375 | chr2:179464104;179464103;179464102 |
N2B | 9741 | 29446;29447;29448 | chr2:178599377;178599376;178599375 | chr2:179464104;179464103;179464102 |
Novex-1 | 9866 | 29821;29822;29823 | chr2:178599377;178599376;178599375 | chr2:179464104;179464103;179464102 |
Novex-2 | 9933 | 30022;30023;30024 | chr2:178599377;178599376;178599375 | chr2:179464104;179464103;179464102 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
W/C | rs1042225014 | -1.201 | 0.997 | D | 0.838 | 0.799 | 0.629801484396 | gnomAD-2.1.1 | 4.34E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.9E-05 | None | 0 | None | 0 | 0 | 0 |
W/C | rs1042225014 | -1.201 | 0.997 | D | 0.838 | 0.799 | 0.629801484396 | gnomAD-4.0.0 | 1.63607E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.80065E-05 | None | 0 | 0 | 0 | 0 | 0 |
W/L | None | None | 0.822 | D | 0.847 | 0.822 | 0.840916574304 | gnomAD-4.0.0 | 6.92739E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.04593E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
W/A | 0.9946 | likely_pathogenic | 0.9909 | pathogenic | -3.142 | Highly Destabilizing | 0.754 | D | 0.867 | deleterious | None | None | None | None | N |
W/C | 0.9949 | likely_pathogenic | 0.992 | pathogenic | -2.19 | Highly Destabilizing | 0.997 | D | 0.838 | deleterious | D | 0.656195064 | None | None | N |
W/D | 0.9996 | likely_pathogenic | 0.9993 | pathogenic | -3.799 | Highly Destabilizing | 0.956 | D | 0.884 | deleterious | None | None | None | None | N |
W/E | 0.9996 | likely_pathogenic | 0.9994 | pathogenic | -3.686 | Highly Destabilizing | 0.956 | D | 0.882 | deleterious | None | None | None | None | N |
W/F | 0.7316 | likely_pathogenic | 0.6608 | pathogenic | -2.07 | Highly Destabilizing | 0.978 | D | 0.767 | deleterious | None | None | None | None | N |
W/G | 0.978 | likely_pathogenic | 0.9678 | pathogenic | -3.381 | Highly Destabilizing | 0.698 | D | 0.843 | deleterious | D | 0.656195064 | None | None | N |
W/H | 0.9958 | likely_pathogenic | 0.994 | pathogenic | -2.482 | Highly Destabilizing | 0.994 | D | 0.855 | deleterious | None | None | None | None | N |
W/I | 0.985 | likely_pathogenic | 0.9764 | pathogenic | -2.22 | Highly Destabilizing | 0.978 | D | 0.886 | deleterious | None | None | None | None | N |
W/K | 0.9997 | likely_pathogenic | 0.9996 | pathogenic | -3.041 | Highly Destabilizing | 0.915 | D | 0.878 | deleterious | None | None | None | None | N |
W/L | 0.9704 | likely_pathogenic | 0.956 | pathogenic | -2.22 | Highly Destabilizing | 0.822 | D | 0.847 | deleterious | D | 0.638964877 | None | None | N |
W/M | 0.9952 | likely_pathogenic | 0.9923 | pathogenic | -1.772 | Destabilizing | 0.998 | D | 0.788 | deleterious | None | None | None | None | N |
W/N | 0.9995 | likely_pathogenic | 0.9991 | pathogenic | -3.834 | Highly Destabilizing | 0.915 | D | 0.888 | deleterious | None | None | None | None | N |
W/P | 0.9985 | likely_pathogenic | 0.9982 | pathogenic | -2.557 | Highly Destabilizing | 0.978 | D | 0.882 | deleterious | None | None | None | None | N |
W/Q | 0.9997 | likely_pathogenic | 0.9995 | pathogenic | -3.622 | Highly Destabilizing | 0.956 | D | 0.864 | deleterious | None | None | None | None | N |
W/R | 0.999 | likely_pathogenic | 0.9984 | pathogenic | -2.817 | Highly Destabilizing | 0.942 | D | 0.882 | deleterious | D | 0.656195064 | None | None | N |
W/S | 0.992 | likely_pathogenic | 0.9863 | pathogenic | -3.906 | Highly Destabilizing | 0.126 | N | 0.749 | deleterious | D | 0.656195064 | None | None | N |
W/T | 0.9963 | likely_pathogenic | 0.9941 | pathogenic | -3.719 | Highly Destabilizing | 0.915 | D | 0.838 | deleterious | None | None | None | None | N |
W/V | 0.9844 | likely_pathogenic | 0.9745 | pathogenic | -2.557 | Highly Destabilizing | 0.956 | D | 0.878 | deleterious | None | None | None | None | N |
W/Y | 0.9316 | likely_pathogenic | 0.9011 | pathogenic | -1.99 | Destabilizing | 0.993 | D | 0.771 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.