Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18807 | 56644;56645;56646 | chr2:178599374;178599373;178599372 | chr2:179464101;179464100;179464099 |
N2AB | 17166 | 51721;51722;51723 | chr2:178599374;178599373;178599372 | chr2:179464101;179464100;179464099 |
N2A | 16239 | 48940;48941;48942 | chr2:178599374;178599373;178599372 | chr2:179464101;179464100;179464099 |
N2B | 9742 | 29449;29450;29451 | chr2:178599374;178599373;178599372 | chr2:179464101;179464100;179464099 |
Novex-1 | 9867 | 29824;29825;29826 | chr2:178599374;178599373;178599372 | chr2:179464101;179464100;179464099 |
Novex-2 | 9934 | 30025;30026;30027 | chr2:178599374;178599373;178599372 | chr2:179464101;179464100;179464099 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | rs2052666305 | None | None | N | 0.113 | 0.121 | 0.246773566709 | gnomAD-4.0.0 | 1.38371E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80791E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.1279 | likely_benign | 0.1201 | benign | -1.403 | Destabilizing | None | N | 0.273 | neutral | None | None | None | None | N |
F/C | 0.119 | likely_benign | 0.1237 | benign | -0.453 | Destabilizing | 0.018 | N | 0.35 | neutral | N | 0.423088483 | None | None | N |
F/D | 0.2342 | likely_benign | 0.1986 | benign | 0.135 | Stabilizing | None | N | 0.362 | neutral | None | None | None | None | N |
F/E | 0.216 | likely_benign | 0.1835 | benign | 0.14 | Stabilizing | None | N | 0.343 | neutral | None | None | None | None | N |
F/G | 0.2328 | likely_benign | 0.2173 | benign | -1.649 | Destabilizing | None | N | 0.359 | neutral | None | None | None | None | N |
F/H | 0.1328 | likely_benign | 0.1234 | benign | -0.084 | Destabilizing | 0.003 | N | 0.321 | neutral | None | None | None | None | N |
F/I | 0.0858 | likely_benign | 0.0836 | benign | -0.729 | Destabilizing | None | N | 0.117 | neutral | N | 0.406406877 | None | None | N |
F/K | 0.1999 | likely_benign | 0.1642 | benign | -0.458 | Destabilizing | None | N | 0.358 | neutral | None | None | None | None | N |
F/L | 0.151 | likely_benign | 0.1534 | benign | -0.729 | Destabilizing | None | N | 0.113 | neutral | N | 0.361442591 | None | None | N |
F/M | 0.1218 | likely_benign | 0.1176 | benign | -0.538 | Destabilizing | None | N | 0.225 | neutral | None | None | None | None | N |
F/N | 0.1219 | likely_benign | 0.1099 | benign | -0.396 | Destabilizing | None | N | 0.342 | neutral | None | None | None | None | N |
F/P | 0.6909 | likely_pathogenic | 0.6122 | pathogenic | -0.938 | Destabilizing | 0.001 | N | 0.397 | neutral | None | None | None | None | N |
F/Q | 0.1364 | likely_benign | 0.1248 | benign | -0.49 | Destabilizing | None | N | 0.371 | neutral | None | None | None | None | N |
F/R | 0.1825 | likely_benign | 0.1593 | benign | 0.126 | Stabilizing | None | N | 0.365 | neutral | None | None | None | None | N |
F/S | 0.0895 | likely_benign | 0.0832 | benign | -1.086 | Destabilizing | None | N | 0.263 | neutral | N | 0.357495422 | None | None | N |
F/T | 0.1477 | likely_benign | 0.1365 | benign | -0.988 | Destabilizing | None | N | 0.255 | neutral | None | None | None | None | N |
F/V | 0.0873 | likely_benign | 0.0847 | benign | -0.938 | Destabilizing | None | N | 0.199 | neutral | N | 0.408831106 | None | None | N |
F/W | 0.2069 | likely_benign | 0.2016 | benign | -0.337 | Destabilizing | 0.051 | N | 0.382 | neutral | None | None | None | None | N |
F/Y | 0.075 | likely_benign | 0.0692 | benign | -0.413 | Destabilizing | 0.001 | N | 0.181 | neutral | N | 0.41214077 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.