Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18812 | 56659;56660;56661 | chr2:178599359;178599358;178599357 | chr2:179464086;179464085;179464084 |
N2AB | 17171 | 51736;51737;51738 | chr2:178599359;178599358;178599357 | chr2:179464086;179464085;179464084 |
N2A | 16244 | 48955;48956;48957 | chr2:178599359;178599358;178599357 | chr2:179464086;179464085;179464084 |
N2B | 9747 | 29464;29465;29466 | chr2:178599359;178599358;178599357 | chr2:179464086;179464085;179464084 |
Novex-1 | 9872 | 29839;29840;29841 | chr2:178599359;178599358;178599357 | chr2:179464086;179464085;179464084 |
Novex-2 | 9939 | 30040;30041;30042 | chr2:178599359;178599358;178599357 | chr2:179464086;179464085;179464084 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | None | None | 1.0 | N | 0.665 | 0.4 | 0.498259528926 | gnomAD-4.0.0 | 6.88294E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.0172E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.8579 | likely_pathogenic | 0.8206 | pathogenic | -0.243 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | N | 0.489930793 | None | None | I |
D/C | 0.9706 | likely_pathogenic | 0.9593 | pathogenic | 0.2 | Stabilizing | 1.0 | D | 0.626 | neutral | None | None | None | None | I |
D/E | 0.8667 | likely_pathogenic | 0.7998 | pathogenic | -0.623 | Destabilizing | 1.0 | D | 0.453 | neutral | N | 0.4851314 | None | None | I |
D/F | 0.9777 | likely_pathogenic | 0.9725 | pathogenic | -0.564 | Destabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | I |
D/G | 0.8531 | likely_pathogenic | 0.7922 | pathogenic | -0.476 | Destabilizing | 1.0 | D | 0.663 | neutral | N | 0.517949776 | None | None | I |
D/H | 0.898 | likely_pathogenic | 0.8626 | pathogenic | -0.912 | Destabilizing | 1.0 | D | 0.623 | neutral | N | 0.505833002 | None | None | I |
D/I | 0.9547 | likely_pathogenic | 0.9353 | pathogenic | 0.327 | Stabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | I |
D/K | 0.9598 | likely_pathogenic | 0.9406 | pathogenic | 0.16 | Stabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | I |
D/L | 0.953 | likely_pathogenic | 0.9379 | pathogenic | 0.327 | Stabilizing | 1.0 | D | 0.672 | neutral | None | None | None | None | I |
D/M | 0.978 | likely_pathogenic | 0.9678 | pathogenic | 0.778 | Stabilizing | 1.0 | D | 0.612 | neutral | None | None | None | None | I |
D/N | 0.2481 | likely_benign | 0.2151 | benign | -0.08 | Destabilizing | 1.0 | D | 0.665 | neutral | N | 0.514153204 | None | None | I |
D/P | 0.9845 | likely_pathogenic | 0.9811 | pathogenic | 0.161 | Stabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | I |
D/Q | 0.9523 | likely_pathogenic | 0.9233 | pathogenic | -0.038 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | I |
D/R | 0.9595 | likely_pathogenic | 0.9375 | pathogenic | 0.022 | Stabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | I |
D/S | 0.5522 | ambiguous | 0.4954 | ambiguous | -0.202 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | I |
D/T | 0.713 | likely_pathogenic | 0.6376 | pathogenic | -0.016 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | I |
D/V | 0.902 | likely_pathogenic | 0.8625 | pathogenic | 0.161 | Stabilizing | 1.0 | D | 0.675 | prob.neutral | N | 0.508288538 | None | None | I |
D/W | 0.9954 | likely_pathogenic | 0.994 | pathogenic | -0.585 | Destabilizing | 1.0 | D | 0.627 | neutral | None | None | None | None | I |
D/Y | 0.8508 | likely_pathogenic | 0.808 | pathogenic | -0.361 | Destabilizing | 1.0 | D | 0.603 | neutral | D | 0.536054031 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.