Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18821 | 56686;56687;56688 | chr2:178599332;178599331;178599330 | chr2:179464059;179464058;179464057 |
N2AB | 17180 | 51763;51764;51765 | chr2:178599332;178599331;178599330 | chr2:179464059;179464058;179464057 |
N2A | 16253 | 48982;48983;48984 | chr2:178599332;178599331;178599330 | chr2:179464059;179464058;179464057 |
N2B | 9756 | 29491;29492;29493 | chr2:178599332;178599331;178599330 | chr2:179464059;179464058;179464057 |
Novex-1 | 9881 | 29866;29867;29868 | chr2:178599332;178599331;178599330 | chr2:179464059;179464058;179464057 |
Novex-2 | 9948 | 30067;30068;30069 | chr2:178599332;178599331;178599330 | chr2:179464059;179464058;179464057 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1576247575 | None | 0.997 | N | 0.655 | 0.263 | 0.529260826313 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/I | rs1576247575 | None | 0.997 | N | 0.655 | 0.263 | 0.529260826313 | gnomAD-4.0.0 | 1.17994E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.52738E-05 | 1.10676E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4514 | ambiguous | 0.3902 | ambiguous | -2.307 | Highly Destabilizing | 0.999 | D | 0.687 | prob.neutral | N | 0.519172235 | None | None | N |
V/C | 0.7652 | likely_pathogenic | 0.7197 | pathogenic | -1.967 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
V/D | 0.7174 | likely_pathogenic | 0.6283 | pathogenic | -3.37 | Highly Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
V/E | 0.5366 | ambiguous | 0.4544 | ambiguous | -3.193 | Highly Destabilizing | 1.0 | D | 0.755 | deleterious | N | 0.501314406 | None | None | N |
V/F | 0.3208 | likely_benign | 0.2703 | benign | -1.32 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
V/G | 0.6007 | likely_pathogenic | 0.5059 | ambiguous | -2.761 | Highly Destabilizing | 1.0 | D | 0.773 | deleterious | N | 0.503627275 | None | None | N |
V/H | 0.7175 | likely_pathogenic | 0.6493 | pathogenic | -2.473 | Highly Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
V/I | 0.0721 | likely_benign | 0.0731 | benign | -1.035 | Destabilizing | 0.997 | D | 0.655 | neutral | N | 0.423800559 | None | None | N |
V/K | 0.5442 | ambiguous | 0.4614 | ambiguous | -2.024 | Highly Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
V/L | 0.3028 | likely_benign | 0.2617 | benign | -1.035 | Destabilizing | 0.997 | D | 0.67 | neutral | N | 0.487214532 | None | None | N |
V/M | 0.2053 | likely_benign | 0.1795 | benign | -1.126 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
V/N | 0.5465 | ambiguous | 0.453 | ambiguous | -2.343 | Highly Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
V/P | 0.9911 | likely_pathogenic | 0.9872 | pathogenic | -1.437 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
V/Q | 0.5173 | ambiguous | 0.4506 | ambiguous | -2.233 | Highly Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
V/R | 0.4845 | ambiguous | 0.4058 | ambiguous | -1.709 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
V/S | 0.4659 | ambiguous | 0.3937 | ambiguous | -2.811 | Highly Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
V/T | 0.2625 | likely_benign | 0.2447 | benign | -2.527 | Highly Destabilizing | 0.999 | D | 0.675 | prob.neutral | None | None | None | None | N |
V/W | 0.8974 | likely_pathogenic | 0.8734 | pathogenic | -1.901 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
V/Y | 0.6899 | likely_pathogenic | 0.621 | pathogenic | -1.632 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.