Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18825 | 56698;56699;56700 | chr2:178599320;178599319;178599318 | chr2:179464047;179464046;179464045 |
N2AB | 17184 | 51775;51776;51777 | chr2:178599320;178599319;178599318 | chr2:179464047;179464046;179464045 |
N2A | 16257 | 48994;48995;48996 | chr2:178599320;178599319;178599318 | chr2:179464047;179464046;179464045 |
N2B | 9760 | 29503;29504;29505 | chr2:178599320;178599319;178599318 | chr2:179464047;179464046;179464045 |
Novex-1 | 9885 | 29878;29879;29880 | chr2:178599320;178599319;178599318 | chr2:179464047;179464046;179464045 |
Novex-2 | 9952 | 30079;30080;30081 | chr2:178599320;178599319;178599318 | chr2:179464047;179464046;179464045 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | None | None | 0.008 | N | 0.183 | 0.143 | 0.226586394389 | gnomAD-4.0.0 | 6.85839E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00513E-07 | 0 | 0 |
R/T | None | None | 0.722 | N | 0.584 | 0.387 | 0.337868961071 | gnomAD-4.0.0 | 2.05752E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.53229E-05 | None | 0 | 0 | 1.80103E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9076 | likely_pathogenic | 0.9074 | pathogenic | -1.832 | Destabilizing | 0.633 | D | 0.588 | neutral | None | None | None | None | N |
R/C | 0.4038 | ambiguous | 0.3358 | benign | -1.752 | Destabilizing | 0.996 | D | 0.811 | deleterious | None | None | None | None | N |
R/D | 0.992 | likely_pathogenic | 0.9931 | pathogenic | -0.778 | Destabilizing | 0.633 | D | 0.643 | neutral | None | None | None | None | N |
R/E | 0.897 | likely_pathogenic | 0.8892 | pathogenic | -0.568 | Destabilizing | 0.011 | N | 0.381 | neutral | None | None | None | None | N |
R/F | 0.9677 | likely_pathogenic | 0.961 | pathogenic | -1.09 | Destabilizing | 0.987 | D | 0.795 | deleterious | None | None | None | None | N |
R/G | 0.8664 | likely_pathogenic | 0.8614 | pathogenic | -2.189 | Highly Destabilizing | 0.722 | D | 0.645 | neutral | N | 0.501402457 | None | None | N |
R/H | 0.5198 | ambiguous | 0.469 | ambiguous | -2.055 | Highly Destabilizing | 0.961 | D | 0.501 | neutral | None | None | None | None | N |
R/I | 0.9166 | likely_pathogenic | 0.9 | pathogenic | -0.806 | Destabilizing | 0.949 | D | 0.805 | deleterious | N | 0.504769819 | None | None | N |
R/K | 0.2346 | likely_benign | 0.2025 | benign | -1.352 | Destabilizing | 0.008 | N | 0.183 | neutral | N | 0.499490396 | None | None | N |
R/L | 0.8348 | likely_pathogenic | 0.8197 | pathogenic | -0.806 | Destabilizing | 0.775 | D | 0.653 | neutral | None | None | None | None | N |
R/M | 0.7706 | likely_pathogenic | 0.7229 | pathogenic | -1.268 | Destabilizing | 0.996 | D | 0.677 | prob.neutral | None | None | None | None | N |
R/N | 0.9758 | likely_pathogenic | 0.9738 | pathogenic | -1.241 | Destabilizing | 0.775 | D | 0.469 | neutral | None | None | None | None | N |
R/P | 0.9978 | likely_pathogenic | 0.9981 | pathogenic | -1.135 | Destabilizing | 0.961 | D | 0.747 | deleterious | None | None | None | None | N |
R/Q | 0.2597 | likely_benign | 0.2279 | benign | -1.134 | Destabilizing | 0.633 | D | 0.478 | neutral | None | None | None | None | N |
R/S | 0.9599 | likely_pathogenic | 0.9581 | pathogenic | -2.145 | Highly Destabilizing | 0.565 | D | 0.553 | neutral | N | 0.474002131 | None | None | N |
R/T | 0.9008 | likely_pathogenic | 0.894 | pathogenic | -1.72 | Destabilizing | 0.722 | D | 0.584 | neutral | N | 0.491185014 | None | None | N |
R/V | 0.9033 | likely_pathogenic | 0.8932 | pathogenic | -1.135 | Destabilizing | 0.923 | D | 0.731 | prob.delet. | None | None | None | None | N |
R/W | 0.7631 | likely_pathogenic | 0.7433 | pathogenic | -0.603 | Destabilizing | 0.996 | D | 0.766 | deleterious | None | None | None | None | N |
R/Y | 0.9124 | likely_pathogenic | 0.8929 | pathogenic | -0.44 | Destabilizing | 0.987 | D | 0.763 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.