Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18828 | 56707;56708;56709 | chr2:178599311;178599310;178599309 | chr2:179464038;179464037;179464036 |
N2AB | 17187 | 51784;51785;51786 | chr2:178599311;178599310;178599309 | chr2:179464038;179464037;179464036 |
N2A | 16260 | 49003;49004;49005 | chr2:178599311;178599310;178599309 | chr2:179464038;179464037;179464036 |
N2B | 9763 | 29512;29513;29514 | chr2:178599311;178599310;178599309 | chr2:179464038;179464037;179464036 |
Novex-1 | 9888 | 29887;29888;29889 | chr2:178599311;178599310;178599309 | chr2:179464038;179464037;179464036 |
Novex-2 | 9955 | 30088;30089;30090 | chr2:178599311;178599310;178599309 | chr2:179464038;179464037;179464036 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | None | None | 0.928 | N | 0.419 | 0.242 | 0.227260227426 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 7.32654E-05 |
N/T | rs71423569 | None | 0.865 | N | 0.428 | 0.202 | 0.241078983079 | gnomAD-4.0.0 | 6.85974E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.66091E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.3006 | likely_benign | 0.2787 | benign | -0.198 | Destabilizing | 0.895 | D | 0.415 | neutral | None | None | None | None | N |
N/C | 0.4547 | ambiguous | 0.3959 | ambiguous | 0.284 | Stabilizing | 0.999 | D | 0.646 | neutral | None | None | None | None | N |
N/D | 0.2161 | likely_benign | 0.218 | benign | 0.095 | Stabilizing | 0.928 | D | 0.419 | neutral | N | 0.443810472 | None | None | N |
N/E | 0.556 | ambiguous | 0.5245 | ambiguous | 0.043 | Stabilizing | 0.944 | D | 0.407 | neutral | None | None | None | None | N |
N/F | 0.6939 | likely_pathogenic | 0.6365 | pathogenic | -0.657 | Destabilizing | 0.992 | D | 0.622 | neutral | None | None | None | None | N |
N/G | 0.2837 | likely_benign | 0.2599 | benign | -0.335 | Destabilizing | 0.895 | D | 0.403 | neutral | None | None | None | None | N |
N/H | 0.1632 | likely_benign | 0.1409 | benign | -0.346 | Destabilizing | 0.989 | D | 0.481 | neutral | N | 0.51086497 | None | None | N |
N/I | 0.4205 | ambiguous | 0.3782 | ambiguous | 0.069 | Stabilizing | 0.989 | D | 0.623 | neutral | N | 0.514270635 | None | None | N |
N/K | 0.4296 | ambiguous | 0.3935 | ambiguous | 0.104 | Stabilizing | 0.865 | D | 0.409 | neutral | N | 0.464303174 | None | None | N |
N/L | 0.3574 | ambiguous | 0.3257 | benign | 0.069 | Stabilizing | 0.983 | D | 0.571 | neutral | None | None | None | None | N |
N/M | 0.5024 | ambiguous | 0.4711 | ambiguous | 0.281 | Stabilizing | 0.999 | D | 0.57 | neutral | None | None | None | None | N |
N/P | 0.6953 | likely_pathogenic | 0.6541 | pathogenic | 0.006 | Stabilizing | 0.992 | D | 0.545 | neutral | None | None | None | None | N |
N/Q | 0.444 | ambiguous | 0.4074 | ambiguous | -0.31 | Destabilizing | 0.983 | D | 0.457 | neutral | None | None | None | None | N |
N/R | 0.4743 | ambiguous | 0.4306 | ambiguous | 0.183 | Stabilizing | 0.983 | D | 0.466 | neutral | None | None | None | None | N |
N/S | 0.0945 | likely_benign | 0.0898 | benign | -0.066 | Destabilizing | 0.146 | N | 0.287 | neutral | N | 0.455432975 | None | None | N |
N/T | 0.1793 | likely_benign | 0.1673 | benign | 0.009 | Stabilizing | 0.865 | D | 0.428 | neutral | N | 0.483427653 | None | None | N |
N/V | 0.3738 | ambiguous | 0.3374 | benign | 0.006 | Stabilizing | 0.983 | D | 0.609 | neutral | None | None | None | None | N |
N/W | 0.8594 | likely_pathogenic | 0.8286 | pathogenic | -0.707 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | None | None | None | None | N |
N/Y | 0.3084 | likely_benign | 0.2639 | benign | -0.418 | Destabilizing | 0.996 | D | 0.57 | neutral | N | 0.511038328 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.