Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18830 | 56713;56714;56715 | chr2:178599305;178599304;178599303 | chr2:179464032;179464031;179464030 |
N2AB | 17189 | 51790;51791;51792 | chr2:178599305;178599304;178599303 | chr2:179464032;179464031;179464030 |
N2A | 16262 | 49009;49010;49011 | chr2:178599305;178599304;178599303 | chr2:179464032;179464031;179464030 |
N2B | 9765 | 29518;29519;29520 | chr2:178599305;178599304;178599303 | chr2:179464032;179464031;179464030 |
Novex-1 | 9890 | 29893;29894;29895 | chr2:178599305;178599304;178599303 | chr2:179464032;179464031;179464030 |
Novex-2 | 9957 | 30094;30095;30096 | chr2:178599305;178599304;178599303 | chr2:179464032;179464031;179464030 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs1004119141 | None | 0.942 | N | 0.371 | 0.204 | 0.188950314367 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/N | rs1004119141 | None | 0.942 | N | 0.371 | 0.204 | 0.188950314367 | gnomAD-4.0.0 | 2.57737E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.80467E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5621 | ambiguous | 0.483 | ambiguous | 0.007 | Stabilizing | 0.754 | D | 0.445 | neutral | None | None | None | None | N |
K/C | 0.8484 | likely_pathogenic | 0.7984 | pathogenic | -0.471 | Destabilizing | 0.998 | D | 0.583 | neutral | None | None | None | None | N |
K/D | 0.72 | likely_pathogenic | 0.6359 | pathogenic | -0.252 | Destabilizing | 0.978 | D | 0.406 | neutral | None | None | None | None | N |
K/E | 0.3795 | ambiguous | 0.299 | benign | -0.266 | Destabilizing | 0.822 | D | 0.429 | neutral | N | 0.471743648 | None | None | N |
K/F | 0.9117 | likely_pathogenic | 0.8671 | pathogenic | -0.344 | Destabilizing | 0.956 | D | 0.535 | neutral | None | None | None | None | N |
K/G | 0.5928 | likely_pathogenic | 0.5333 | ambiguous | -0.113 | Destabilizing | 0.978 | D | 0.383 | neutral | None | None | None | None | N |
K/H | 0.4883 | ambiguous | 0.4309 | ambiguous | -0.181 | Destabilizing | 0.994 | D | 0.394 | neutral | None | None | None | None | N |
K/I | 0.6172 | likely_pathogenic | 0.5109 | ambiguous | 0.239 | Stabilizing | 0.915 | D | 0.545 | neutral | None | None | None | None | N |
K/L | 0.5369 | ambiguous | 0.4504 | ambiguous | 0.239 | Stabilizing | 0.514 | D | 0.435 | neutral | None | None | None | None | N |
K/M | 0.4155 | ambiguous | 0.3277 | benign | -0.126 | Destabilizing | 0.247 | N | 0.431 | neutral | N | 0.491390988 | None | None | N |
K/N | 0.594 | likely_pathogenic | 0.5201 | ambiguous | -0.004 | Destabilizing | 0.942 | D | 0.371 | neutral | N | 0.438036506 | None | None | N |
K/P | 0.7008 | likely_pathogenic | 0.6472 | pathogenic | 0.184 | Stabilizing | 0.993 | D | 0.39 | neutral | None | None | None | None | N |
K/Q | 0.2229 | likely_benign | 0.194 | benign | -0.139 | Destabilizing | 0.942 | D | 0.377 | neutral | N | 0.480672562 | None | None | N |
K/R | 0.1021 | likely_benign | 0.0999 | benign | -0.102 | Destabilizing | 0.032 | N | 0.305 | neutral | N | 0.479539198 | None | None | N |
K/S | 0.6295 | likely_pathogenic | 0.5658 | pathogenic | -0.372 | Destabilizing | 0.86 | D | 0.389 | neutral | None | None | None | None | N |
K/T | 0.3343 | likely_benign | 0.2774 | benign | -0.272 | Destabilizing | 0.942 | D | 0.348 | neutral | N | 0.477690972 | None | None | N |
K/V | 0.5447 | ambiguous | 0.4529 | ambiguous | 0.184 | Stabilizing | 0.754 | D | 0.389 | neutral | None | None | None | None | N |
K/W | 0.8812 | likely_pathogenic | 0.8426 | pathogenic | -0.452 | Destabilizing | 0.998 | D | 0.623 | neutral | None | None | None | None | N |
K/Y | 0.8127 | likely_pathogenic | 0.752 | pathogenic | -0.099 | Destabilizing | 0.978 | D | 0.465 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.