Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18833 | 56722;56723;56724 | chr2:178599296;178599295;178599294 | chr2:179464023;179464022;179464021 |
N2AB | 17192 | 51799;51800;51801 | chr2:178599296;178599295;178599294 | chr2:179464023;179464022;179464021 |
N2A | 16265 | 49018;49019;49020 | chr2:178599296;178599295;178599294 | chr2:179464023;179464022;179464021 |
N2B | 9768 | 29527;29528;29529 | chr2:178599296;178599295;178599294 | chr2:179464023;179464022;179464021 |
Novex-1 | 9893 | 29902;29903;29904 | chr2:178599296;178599295;178599294 | chr2:179464023;179464022;179464021 |
Novex-2 | 9960 | 30103;30104;30105 | chr2:178599296;178599295;178599294 | chr2:179464023;179464022;179464021 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1553665072 | None | 0.863 | N | 0.501 | 0.186 | 0.566593488784 | gnomAD-4.0.0 | 1.6052E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.46054E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2496 | likely_benign | 0.2283 | benign | -1.061 | Destabilizing | 0.046 | N | 0.235 | neutral | N | 0.497066167 | None | None | N |
V/C | 0.6947 | likely_pathogenic | 0.6568 | pathogenic | -0.773 | Destabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | N |
V/D | 0.6152 | likely_pathogenic | 0.5036 | ambiguous | -0.864 | Destabilizing | 0.991 | D | 0.725 | prob.delet. | N | 0.496682164 | None | None | N |
V/E | 0.4969 | ambiguous | 0.3867 | ambiguous | -0.903 | Destabilizing | 0.986 | D | 0.701 | prob.neutral | None | None | None | None | N |
V/F | 0.2226 | likely_benign | 0.1928 | benign | -0.852 | Destabilizing | 0.997 | D | 0.671 | neutral | N | 0.495951446 | None | None | N |
V/G | 0.2563 | likely_benign | 0.2447 | benign | -1.307 | Destabilizing | 0.964 | D | 0.672 | neutral | N | 0.518385588 | None | None | N |
V/H | 0.6487 | likely_pathogenic | 0.5667 | pathogenic | -0.732 | Destabilizing | 0.999 | D | 0.703 | prob.neutral | None | None | None | None | N |
V/I | 0.0841 | likely_benign | 0.0834 | benign | -0.513 | Destabilizing | 0.863 | D | 0.501 | neutral | N | 0.461588156 | None | None | N |
V/K | 0.5973 | likely_pathogenic | 0.4672 | ambiguous | -1.005 | Destabilizing | 0.986 | D | 0.701 | prob.neutral | None | None | None | None | N |
V/L | 0.2413 | likely_benign | 0.2067 | benign | -0.513 | Destabilizing | 0.863 | D | 0.513 | neutral | N | 0.491044271 | None | None | N |
V/M | 0.1717 | likely_benign | 0.154 | benign | -0.47 | Destabilizing | 0.998 | D | 0.64 | neutral | None | None | None | None | N |
V/N | 0.3023 | likely_benign | 0.259 | benign | -0.808 | Destabilizing | 0.993 | D | 0.728 | prob.delet. | None | None | None | None | N |
V/P | 0.9192 | likely_pathogenic | 0.9062 | pathogenic | -0.66 | Destabilizing | 0.993 | D | 0.683 | prob.neutral | None | None | None | None | N |
V/Q | 0.4044 | ambiguous | 0.3395 | benign | -1.002 | Destabilizing | 0.993 | D | 0.691 | prob.neutral | None | None | None | None | N |
V/R | 0.5479 | ambiguous | 0.4317 | ambiguous | -0.416 | Destabilizing | 0.993 | D | 0.73 | prob.delet. | None | None | None | None | N |
V/S | 0.2418 | likely_benign | 0.2278 | benign | -1.241 | Destabilizing | 0.973 | D | 0.634 | neutral | None | None | None | None | N |
V/T | 0.2337 | likely_benign | 0.2195 | benign | -1.178 | Destabilizing | 0.953 | D | 0.545 | neutral | None | None | None | None | N |
V/W | 0.8547 | likely_pathogenic | 0.7996 | pathogenic | -0.996 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | N |
V/Y | 0.588 | likely_pathogenic | 0.5146 | ambiguous | -0.718 | Destabilizing | 0.998 | D | 0.677 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.