Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18834 | 56725;56726;56727 | chr2:178599293;178599292;178599291 | chr2:179464020;179464019;179464018 |
N2AB | 17193 | 51802;51803;51804 | chr2:178599293;178599292;178599291 | chr2:179464020;179464019;179464018 |
N2A | 16266 | 49021;49022;49023 | chr2:178599293;178599292;178599291 | chr2:179464020;179464019;179464018 |
N2B | 9769 | 29530;29531;29532 | chr2:178599293;178599292;178599291 | chr2:179464020;179464019;179464018 |
Novex-1 | 9894 | 29905;29906;29907 | chr2:178599293;178599292;178599291 | chr2:179464020;179464019;179464018 |
Novex-2 | 9961 | 30106;30107;30108 | chr2:178599293;178599292;178599291 | chr2:179464020;179464019;179464018 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/N | None | None | 0.024 | N | 0.357 | 0.128 | 0.263612267334 | gnomAD-4.0.0 | 1.60852E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8776E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.1719 | likely_benign | 0.1461 | benign | -0.232 | Destabilizing | 0.016 | N | 0.387 | neutral | None | None | None | None | N |
H/C | 0.1061 | likely_benign | 0.0985 | benign | 0.269 | Stabilizing | 0.864 | D | 0.466 | neutral | None | None | None | None | N |
H/D | 0.2854 | likely_benign | 0.2252 | benign | -0.198 | Destabilizing | 0.055 | N | 0.484 | neutral | N | 0.431131963 | None | None | N |
H/E | 0.2477 | likely_benign | 0.2067 | benign | -0.161 | Destabilizing | 0.016 | N | 0.362 | neutral | None | None | None | None | N |
H/F | 0.2494 | likely_benign | 0.2135 | benign | 0.55 | Stabilizing | 0.356 | N | 0.502 | neutral | None | None | None | None | N |
H/G | 0.2168 | likely_benign | 0.193 | benign | -0.526 | Destabilizing | 0.016 | N | 0.463 | neutral | None | None | None | None | N |
H/I | 0.25 | likely_benign | 0.1984 | benign | 0.533 | Stabilizing | 0.356 | N | 0.529 | neutral | None | None | None | None | N |
H/K | 0.1595 | likely_benign | 0.1601 | benign | -0.349 | Destabilizing | 0.016 | N | 0.448 | neutral | None | None | None | None | N |
H/L | 0.0913 | likely_benign | 0.0789 | benign | 0.533 | Stabilizing | 0.055 | N | 0.499 | neutral | N | 0.426707578 | None | None | N |
H/M | 0.3063 | likely_benign | 0.267 | benign | 0.37 | Stabilizing | 0.628 | D | 0.483 | neutral | None | None | None | None | N |
H/N | 0.1337 | likely_benign | 0.1155 | benign | -0.356 | Destabilizing | 0.024 | N | 0.357 | neutral | N | 0.430785246 | None | None | N |
H/P | 0.0797 | likely_benign | 0.0735 | benign | 0.302 | Stabilizing | None | N | 0.26 | neutral | N | 0.375817398 | None | None | N |
H/Q | 0.112 | likely_benign | 0.1157 | benign | -0.222 | Destabilizing | 0.055 | N | 0.347 | neutral | N | 0.419568175 | None | None | N |
H/R | 0.0606 | likely_benign | 0.0703 | benign | -0.826 | Destabilizing | None | N | 0.159 | neutral | N | 0.420645611 | None | None | N |
H/S | 0.1817 | likely_benign | 0.1556 | benign | -0.323 | Destabilizing | None | N | 0.217 | neutral | None | None | None | None | N |
H/T | 0.1764 | likely_benign | 0.1527 | benign | -0.189 | Destabilizing | 0.016 | N | 0.486 | neutral | None | None | None | None | N |
H/V | 0.1904 | likely_benign | 0.1575 | benign | 0.302 | Stabilizing | 0.072 | N | 0.511 | neutral | None | None | None | None | N |
H/W | 0.2435 | likely_benign | 0.2339 | benign | 0.654 | Stabilizing | 0.864 | D | 0.492 | neutral | None | None | None | None | N |
H/Y | 0.1011 | likely_benign | 0.0836 | benign | 0.864 | Stabilizing | 0.106 | N | 0.406 | neutral | N | 0.443234469 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.