Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18836 | 56731;56732;56733 | chr2:178599287;178599286;178599285 | chr2:179464014;179464013;179464012 |
N2AB | 17195 | 51808;51809;51810 | chr2:178599287;178599286;178599285 | chr2:179464014;179464013;179464012 |
N2A | 16268 | 49027;49028;49029 | chr2:178599287;178599286;178599285 | chr2:179464014;179464013;179464012 |
N2B | 9771 | 29536;29537;29538 | chr2:178599287;178599286;178599285 | chr2:179464014;179464013;179464012 |
Novex-1 | 9896 | 29911;29912;29913 | chr2:178599287;178599286;178599285 | chr2:179464014;179464013;179464012 |
Novex-2 | 9963 | 30112;30113;30114 | chr2:178599287;178599286;178599285 | chr2:179464014;179464013;179464012 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | None | None | 0.896 | N | 0.5 | 0.42 | 0.623559015015 | gnomAD-4.0.0 | 1.61964E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8881E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1104 | likely_benign | 0.0941 | benign | -0.59 | Destabilizing | 0.007 | N | 0.141 | neutral | N | 0.457126486 | None | None | N |
S/C | 0.1272 | likely_benign | 0.1097 | benign | -0.378 | Destabilizing | 0.009 | N | 0.231 | neutral | N | 0.480273236 | None | None | N |
S/D | 0.6486 | likely_pathogenic | 0.5242 | ambiguous | -0.626 | Destabilizing | 0.617 | D | 0.481 | neutral | None | None | None | None | N |
S/E | 0.819 | likely_pathogenic | 0.6853 | pathogenic | -0.528 | Destabilizing | 0.617 | D | 0.431 | neutral | None | None | None | None | N |
S/F | 0.451 | ambiguous | 0.3276 | benign | -0.62 | Destabilizing | 0.896 | D | 0.5 | neutral | N | 0.482791223 | None | None | N |
S/G | 0.1591 | likely_benign | 0.1298 | benign | -0.934 | Destabilizing | 0.4 | N | 0.415 | neutral | None | None | None | None | N |
S/H | 0.5919 | likely_pathogenic | 0.4671 | ambiguous | -1.439 | Destabilizing | 0.992 | D | 0.447 | neutral | None | None | None | None | N |
S/I | 0.3492 | ambiguous | 0.2629 | benign | 0.241 | Stabilizing | 0.447 | N | 0.455 | neutral | None | None | None | None | N |
S/K | 0.8975 | likely_pathogenic | 0.7791 | pathogenic | -0.517 | Destabilizing | 0.617 | D | 0.429 | neutral | None | None | None | None | N |
S/L | 0.1901 | likely_benign | 0.1443 | benign | 0.241 | Stabilizing | 0.447 | N | 0.418 | neutral | None | None | None | None | N |
S/M | 0.3261 | likely_benign | 0.2357 | benign | 0.29 | Stabilizing | 0.92 | D | 0.464 | neutral | None | None | None | None | N |
S/N | 0.3055 | likely_benign | 0.224 | benign | -0.858 | Destabilizing | 0.617 | D | 0.479 | neutral | None | None | None | None | N |
S/P | 0.7671 | likely_pathogenic | 0.637 | pathogenic | 0.001 | Stabilizing | 0.896 | D | 0.457 | neutral | N | 0.508478026 | None | None | N |
S/Q | 0.7609 | likely_pathogenic | 0.6316 | pathogenic | -0.746 | Destabilizing | 0.92 | D | 0.513 | neutral | None | None | None | None | N |
S/R | 0.8574 | likely_pathogenic | 0.7314 | pathogenic | -0.69 | Destabilizing | 0.85 | D | 0.462 | neutral | None | None | None | None | N |
S/T | 0.0745 | likely_benign | 0.0627 | benign | -0.653 | Destabilizing | 0.002 | N | 0.133 | neutral | N | 0.454987471 | None | None | N |
S/V | 0.2954 | likely_benign | 0.2221 | benign | 0.001 | Stabilizing | 0.447 | N | 0.409 | neutral | None | None | None | None | N |
S/W | 0.6216 | likely_pathogenic | 0.4963 | ambiguous | -0.797 | Destabilizing | 0.992 | D | 0.555 | neutral | None | None | None | None | N |
S/Y | 0.4253 | ambiguous | 0.3119 | benign | -0.409 | Destabilizing | 0.963 | D | 0.507 | neutral | N | 0.500647976 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.