Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18837 | 56734;56735;56736 | chr2:178599284;178599283;178599282 | chr2:179464011;179464010;179464009 |
N2AB | 17196 | 51811;51812;51813 | chr2:178599284;178599283;178599282 | chr2:179464011;179464010;179464009 |
N2A | 16269 | 49030;49031;49032 | chr2:178599284;178599283;178599282 | chr2:179464011;179464010;179464009 |
N2B | 9772 | 29539;29540;29541 | chr2:178599284;178599283;178599282 | chr2:179464011;179464010;179464009 |
Novex-1 | 9897 | 29914;29915;29916 | chr2:178599284;178599283;178599282 | chr2:179464011;179464010;179464009 |
Novex-2 | 9964 | 30115;30116;30117 | chr2:178599284;178599283;178599282 | chr2:179464011;179464010;179464009 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | None | None | 0.09 | N | 0.263 | 0.076 | 0.18995819373 | gnomAD-4.0.0 | 1.37886E-06 | None | None | None | None | N | None | 3.04488E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.19654E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0852 | likely_benign | 0.0866 | benign | -0.537 | Destabilizing | 0.207 | N | 0.295 | neutral | None | None | None | None | N |
S/C | 0.1227 | likely_benign | 0.113 | benign | -0.41 | Destabilizing | 0.975 | D | 0.358 | neutral | N | 0.505526606 | None | None | N |
S/D | 0.3082 | likely_benign | 0.2506 | benign | -0.735 | Destabilizing | 0.001 | N | 0.088 | neutral | None | None | None | None | N |
S/E | 0.4403 | ambiguous | 0.3718 | ambiguous | -0.743 | Destabilizing | 0.116 | N | 0.274 | neutral | None | None | None | None | N |
S/F | 0.2831 | likely_benign | 0.2671 | benign | -0.706 | Destabilizing | 0.932 | D | 0.355 | neutral | None | None | None | None | N |
S/G | 0.0926 | likely_benign | 0.0848 | benign | -0.791 | Destabilizing | 0.09 | N | 0.263 | neutral | N | 0.501549267 | None | None | N |
S/H | 0.3295 | likely_benign | 0.2771 | benign | -1.375 | Destabilizing | 0.69 | D | 0.364 | neutral | None | None | None | None | N |
S/I | 0.2145 | likely_benign | 0.1943 | benign | 0.027 | Stabilizing | 0.773 | D | 0.388 | neutral | N | 0.52013224 | None | None | N |
S/K | 0.5324 | ambiguous | 0.4233 | ambiguous | -0.926 | Destabilizing | 0.002 | N | 0.129 | neutral | None | None | None | None | N |
S/L | 0.1311 | likely_benign | 0.1248 | benign | 0.027 | Stabilizing | 0.388 | N | 0.339 | neutral | None | None | None | None | N |
S/M | 0.2286 | likely_benign | 0.22 | benign | 0.37 | Stabilizing | 0.981 | D | 0.353 | neutral | None | None | None | None | N |
S/N | 0.117 | likely_benign | 0.1024 | benign | -0.902 | Destabilizing | None | N | 0.08 | neutral | N | 0.513881059 | None | None | N |
S/P | 0.2201 | likely_benign | 0.2117 | benign | -0.126 | Destabilizing | 0.818 | D | 0.401 | neutral | None | None | None | None | N |
S/Q | 0.4349 | ambiguous | 0.3776 | ambiguous | -1.057 | Destabilizing | 0.388 | N | 0.325 | neutral | None | None | None | None | N |
S/R | 0.4845 | ambiguous | 0.3812 | ambiguous | -0.785 | Destabilizing | 0.193 | N | 0.383 | neutral | N | 0.494313863 | None | None | N |
S/T | 0.0885 | likely_benign | 0.0898 | benign | -0.815 | Destabilizing | 0.165 | N | 0.259 | neutral | N | 0.475189384 | None | None | N |
S/V | 0.1953 | likely_benign | 0.1865 | benign | -0.126 | Destabilizing | 0.563 | D | 0.347 | neutral | None | None | None | None | N |
S/W | 0.3769 | ambiguous | 0.3322 | benign | -0.759 | Destabilizing | 0.981 | D | 0.524 | neutral | None | None | None | None | N |
S/Y | 0.2475 | likely_benign | 0.2095 | benign | -0.487 | Destabilizing | 0.932 | D | 0.355 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.