Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18848 | 56767;56768;56769 | chr2:178599251;178599250;178599249 | chr2:179463978;179463977;179463976 |
N2AB | 17207 | 51844;51845;51846 | chr2:178599251;178599250;178599249 | chr2:179463978;179463977;179463976 |
N2A | 16280 | 49063;49064;49065 | chr2:178599251;178599250;178599249 | chr2:179463978;179463977;179463976 |
N2B | 9783 | 29572;29573;29574 | chr2:178599251;178599250;178599249 | chr2:179463978;179463977;179463976 |
Novex-1 | 9908 | 29947;29948;29949 | chr2:178599251;178599250;178599249 | chr2:179463978;179463977;179463976 |
Novex-2 | 9975 | 30148;30149;30150 | chr2:178599251;178599250;178599249 | chr2:179463978;179463977;179463976 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs2052641171 | None | 0.961 | N | 0.461 | 0.204 | 0.272639205421 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/E | rs2052641171 | None | 0.961 | N | 0.461 | 0.204 | 0.272639205421 | gnomAD-4.0.0 | 6.57765E-06 | None | None | None | None | N | None | 0 | 6.55652E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/R | rs879138127 | None | 0.031 | N | 0.139 | 0.084 | None | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/R | rs879138127 | None | 0.031 | N | 0.139 | 0.084 | None | gnomAD-4.0.0 | 6.57843E-06 | None | None | None | None | N | None | 2.41383E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5057 | ambiguous | 0.5748 | pathogenic | 0.086 | Stabilizing | 0.97 | D | 0.434 | neutral | None | None | None | None | N |
K/C | 0.72 | likely_pathogenic | 0.7195 | pathogenic | -0.301 | Destabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | N |
K/D | 0.6634 | likely_pathogenic | 0.7247 | pathogenic | -0.218 | Destabilizing | 0.996 | D | 0.473 | neutral | None | None | None | None | N |
K/E | 0.4179 | ambiguous | 0.4839 | ambiguous | -0.213 | Destabilizing | 0.961 | D | 0.461 | neutral | N | 0.448616072 | None | None | N |
K/F | 0.8803 | likely_pathogenic | 0.8967 | pathogenic | -0.152 | Destabilizing | 0.999 | D | 0.614 | neutral | None | None | None | None | N |
K/G | 0.4271 | ambiguous | 0.4996 | ambiguous | -0.084 | Destabilizing | 0.985 | D | 0.471 | neutral | None | None | None | None | N |
K/H | 0.2961 | likely_benign | 0.3085 | benign | -0.211 | Destabilizing | 0.999 | D | 0.499 | neutral | None | None | None | None | N |
K/I | 0.7516 | likely_pathogenic | 0.7774 | pathogenic | 0.455 | Stabilizing | 0.998 | D | 0.607 | neutral | N | 0.498391531 | None | None | N |
K/L | 0.5869 | likely_pathogenic | 0.6429 | pathogenic | 0.455 | Stabilizing | 0.97 | D | 0.471 | neutral | None | None | None | None | N |
K/M | 0.4774 | ambiguous | 0.5267 | ambiguous | 0.016 | Stabilizing | 1.0 | D | 0.501 | neutral | None | None | None | None | N |
K/N | 0.5045 | ambiguous | 0.5693 | pathogenic | 0.122 | Stabilizing | 0.994 | D | 0.455 | neutral | N | 0.379137344 | None | None | N |
K/P | 0.853 | likely_pathogenic | 0.8865 | pathogenic | 0.357 | Stabilizing | 0.999 | D | 0.497 | neutral | None | None | None | None | N |
K/Q | 0.1998 | likely_benign | 0.2274 | benign | -0.005 | Destabilizing | 0.989 | D | 0.487 | neutral | N | 0.505336146 | None | None | N |
K/R | 0.0797 | likely_benign | 0.0853 | benign | -0.033 | Destabilizing | 0.031 | N | 0.139 | neutral | N | 0.398323324 | None | None | N |
K/S | 0.5247 | ambiguous | 0.6074 | pathogenic | -0.24 | Destabilizing | 0.985 | D | 0.454 | neutral | None | None | None | None | N |
K/T | 0.3968 | ambiguous | 0.4709 | ambiguous | -0.104 | Destabilizing | 0.98 | D | 0.465 | neutral | N | 0.491772203 | None | None | N |
K/V | 0.6332 | likely_pathogenic | 0.6736 | pathogenic | 0.357 | Stabilizing | 0.996 | D | 0.491 | neutral | None | None | None | None | N |
K/W | 0.8424 | likely_pathogenic | 0.8552 | pathogenic | -0.25 | Destabilizing | 1.0 | D | 0.678 | prob.neutral | None | None | None | None | N |
K/Y | 0.6985 | likely_pathogenic | 0.7114 | pathogenic | 0.102 | Stabilizing | 0.999 | D | 0.567 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.