Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18851 | 56776;56777;56778 | chr2:178599242;178599241;178599240 | chr2:179463969;179463968;179463967 |
N2AB | 17210 | 51853;51854;51855 | chr2:178599242;178599241;178599240 | chr2:179463969;179463968;179463967 |
N2A | 16283 | 49072;49073;49074 | chr2:178599242;178599241;178599240 | chr2:179463969;179463968;179463967 |
N2B | 9786 | 29581;29582;29583 | chr2:178599242;178599241;178599240 | chr2:179463969;179463968;179463967 |
Novex-1 | 9911 | 29956;29957;29958 | chr2:178599242;178599241;178599240 | chr2:179463969;179463968;179463967 |
Novex-2 | 9978 | 30157;30158;30159 | chr2:178599242;178599241;178599240 | chr2:179463969;179463968;179463967 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.963 | N | 0.529 | 0.251 | 0.301455362545 | gnomAD-4.0.0 | 1.75616E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.94977E-05 | 0 | 0 | 0 | 0 |
E/Q | rs1347369638 | None | 0.989 | N | 0.653 | 0.283 | 0.254244900254 | gnomAD-4.0.0 | 7.12769E-07 | None | None | None | None | N | None | 3.20718E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1553 | likely_benign | 0.1901 | benign | -0.586 | Destabilizing | 0.039 | N | 0.277 | neutral | N | 0.520441672 | None | None | N |
E/C | 0.8821 | likely_pathogenic | 0.9038 | pathogenic | -0.113 | Destabilizing | 0.998 | D | 0.699 | prob.neutral | None | None | None | None | N |
E/D | 0.2488 | likely_benign | 0.2674 | benign | -0.58 | Destabilizing | 0.963 | D | 0.529 | neutral | N | 0.485651606 | None | None | N |
E/F | 0.8889 | likely_pathogenic | 0.9168 | pathogenic | -0.465 | Destabilizing | 0.992 | D | 0.693 | prob.neutral | None | None | None | None | N |
E/G | 0.2978 | likely_benign | 0.3742 | ambiguous | -0.829 | Destabilizing | 0.865 | D | 0.553 | neutral | N | 0.497261401 | None | None | N |
E/H | 0.6221 | likely_pathogenic | 0.6751 | pathogenic | -0.49 | Destabilizing | 0.999 | D | 0.609 | neutral | None | None | None | None | N |
E/I | 0.4923 | ambiguous | 0.5623 | ambiguous | 0.036 | Stabilizing | 0.983 | D | 0.675 | prob.neutral | None | None | None | None | N |
E/K | 0.2106 | likely_benign | 0.2517 | benign | -0.039 | Destabilizing | 0.928 | D | 0.586 | neutral | N | 0.518404231 | None | None | N |
E/L | 0.5239 | ambiguous | 0.6139 | pathogenic | 0.036 | Stabilizing | 0.968 | D | 0.622 | neutral | None | None | None | None | N |
E/M | 0.6077 | likely_pathogenic | 0.6808 | pathogenic | 0.311 | Stabilizing | 0.999 | D | 0.632 | neutral | None | None | None | None | N |
E/N | 0.4867 | ambiguous | 0.5261 | ambiguous | -0.304 | Destabilizing | 0.992 | D | 0.645 | neutral | None | None | None | None | N |
E/P | 0.348 | ambiguous | 0.4155 | ambiguous | -0.151 | Destabilizing | 0.992 | D | 0.606 | neutral | None | None | None | None | N |
E/Q | 0.1638 | likely_benign | 0.1929 | benign | -0.262 | Destabilizing | 0.989 | D | 0.653 | neutral | N | 0.517769513 | None | None | N |
E/R | 0.3397 | likely_benign | 0.3953 | ambiguous | 0.153 | Stabilizing | 0.983 | D | 0.644 | neutral | None | None | None | None | N |
E/S | 0.3112 | likely_benign | 0.3518 | ambiguous | -0.513 | Destabilizing | 0.895 | D | 0.549 | neutral | None | None | None | None | N |
E/T | 0.3082 | likely_benign | 0.3619 | ambiguous | -0.324 | Destabilizing | 0.983 | D | 0.573 | neutral | None | None | None | None | N |
E/V | 0.2709 | likely_benign | 0.3289 | benign | -0.151 | Destabilizing | 0.957 | D | 0.574 | neutral | N | 0.487791199 | None | None | N |
E/W | 0.9565 | likely_pathogenic | 0.9711 | pathogenic | -0.311 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | N |
E/Y | 0.7906 | likely_pathogenic | 0.8293 | pathogenic | -0.234 | Destabilizing | 0.997 | D | 0.656 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.