Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18852 | 56779;56780;56781 | chr2:178599239;178599238;178599237 | chr2:179463966;179463965;179463964 |
N2AB | 17211 | 51856;51857;51858 | chr2:178599239;178599238;178599237 | chr2:179463966;179463965;179463964 |
N2A | 16284 | 49075;49076;49077 | chr2:178599239;178599238;178599237 | chr2:179463966;179463965;179463964 |
N2B | 9787 | 29584;29585;29586 | chr2:178599239;178599238;178599237 | chr2:179463966;179463965;179463964 |
Novex-1 | 9912 | 29959;29960;29961 | chr2:178599239;178599238;178599237 | chr2:179463966;179463965;179463964 |
Novex-2 | 9979 | 30160;30161;30162 | chr2:178599239;178599238;178599237 | chr2:179463966;179463965;179463964 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/V | rs1283827826 | -0.451 | 0.89 | D | 0.763 | 0.384 | 0.577534042849 | gnomAD-2.1.1 | 1.5E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.55958E-04 | None | 0 | 0 | 0 |
G/V | rs1283827826 | -0.451 | 0.89 | D | 0.763 | 0.384 | 0.577534042849 | gnomAD-4.0.0 | 5.29891E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 5.35447E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.4075 | ambiguous | 0.5214 | ambiguous | -0.393 | Destabilizing | 0.032 | N | 0.348 | neutral | N | 0.484115258 | None | None | N |
G/C | 0.4625 | ambiguous | 0.5572 | ambiguous | -0.74 | Destabilizing | 0.992 | D | 0.818 | deleterious | D | 0.540949692 | None | None | N |
G/D | 0.2218 | likely_benign | 0.3712 | ambiguous | -1.021 | Destabilizing | 0.032 | N | 0.423 | neutral | N | 0.477176271 | None | None | N |
G/E | 0.4476 | ambiguous | 0.5929 | pathogenic | -1.18 | Destabilizing | 0.915 | D | 0.685 | prob.neutral | None | None | None | None | N |
G/F | 0.8069 | likely_pathogenic | 0.8797 | pathogenic | -1.103 | Destabilizing | 0.994 | D | 0.778 | deleterious | None | None | None | None | N |
G/H | 0.5562 | ambiguous | 0.6798 | pathogenic | -0.777 | Destabilizing | 0.994 | D | 0.753 | deleterious | None | None | None | None | N |
G/I | 0.8125 | likely_pathogenic | 0.8952 | pathogenic | -0.443 | Destabilizing | 0.956 | D | 0.782 | deleterious | None | None | None | None | N |
G/K | 0.7046 | likely_pathogenic | 0.7761 | pathogenic | -1.05 | Destabilizing | 0.956 | D | 0.687 | prob.neutral | None | None | None | None | N |
G/L | 0.7812 | likely_pathogenic | 0.8707 | pathogenic | -0.443 | Destabilizing | 0.915 | D | 0.762 | deleterious | None | None | None | None | N |
G/M | 0.7765 | likely_pathogenic | 0.8477 | pathogenic | -0.356 | Destabilizing | 0.998 | D | 0.797 | deleterious | None | None | None | None | N |
G/N | 0.2429 | likely_benign | 0.3332 | benign | -0.569 | Destabilizing | 0.076 | N | 0.355 | neutral | None | None | None | None | N |
G/P | 0.9795 | likely_pathogenic | 0.9898 | pathogenic | -0.391 | Destabilizing | 0.978 | D | 0.754 | deleterious | None | None | None | None | N |
G/Q | 0.5577 | ambiguous | 0.6596 | pathogenic | -0.898 | Destabilizing | 0.956 | D | 0.755 | deleterious | None | None | None | None | N |
G/R | 0.6337 | likely_pathogenic | 0.7197 | pathogenic | -0.533 | Destabilizing | 0.942 | D | 0.754 | deleterious | N | 0.521577989 | None | None | N |
G/S | 0.2048 | likely_benign | 0.2688 | benign | -0.66 | Destabilizing | 0.698 | D | 0.578 | neutral | N | 0.490343002 | None | None | N |
G/T | 0.4666 | ambiguous | 0.5645 | pathogenic | -0.764 | Destabilizing | 0.956 | D | 0.669 | neutral | None | None | None | None | N |
G/V | 0.7049 | likely_pathogenic | 0.8258 | pathogenic | -0.391 | Destabilizing | 0.89 | D | 0.763 | deleterious | D | 0.529086408 | None | None | N |
G/W | 0.6924 | likely_pathogenic | 0.7743 | pathogenic | -1.297 | Destabilizing | 0.998 | D | 0.78 | deleterious | None | None | None | None | N |
G/Y | 0.5744 | likely_pathogenic | 0.7223 | pathogenic | -0.949 | Destabilizing | 0.998 | D | 0.779 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.