Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18862 | 56809;56810;56811 | chr2:178599209;178599208;178599207 | chr2:179463936;179463935;179463934 |
N2AB | 17221 | 51886;51887;51888 | chr2:178599209;178599208;178599207 | chr2:179463936;179463935;179463934 |
N2A | 16294 | 49105;49106;49107 | chr2:178599209;178599208;178599207 | chr2:179463936;179463935;179463934 |
N2B | 9797 | 29614;29615;29616 | chr2:178599209;178599208;178599207 | chr2:179463936;179463935;179463934 |
Novex-1 | 9922 | 29989;29990;29991 | chr2:178599209;178599208;178599207 | chr2:179463936;179463935;179463934 |
Novex-2 | 9989 | 30190;30191;30192 | chr2:178599209;178599208;178599207 | chr2:179463936;179463935;179463934 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | None | None | 0.667 | N | 0.563 | 0.224 | 0.263140351381 | gnomAD-4.0.0 | 7.30315E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.77217E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.5217 | ambiguous | 0.4756 | ambiguous | -0.277 | Destabilizing | 0.157 | N | 0.579 | neutral | None | None | None | None | I |
Q/C | 0.8219 | likely_pathogenic | 0.788 | pathogenic | -0.559 | Destabilizing | 0.968 | D | 0.751 | deleterious | None | None | None | None | I |
Q/D | 0.9589 | likely_pathogenic | 0.9498 | pathogenic | -2.305 | Highly Destabilizing | 0.157 | N | 0.515 | neutral | None | None | None | None | I |
Q/E | 0.1189 | likely_benign | 0.1172 | benign | -2.128 | Highly Destabilizing | 0.001 | N | 0.178 | neutral | N | 0.395691238 | None | None | I |
Q/F | 0.9567 | likely_pathogenic | 0.9445 | pathogenic | -0.338 | Destabilizing | 0.89 | D | 0.769 | deleterious | None | None | None | None | I |
Q/G | 0.7448 | likely_pathogenic | 0.7031 | pathogenic | -0.616 | Destabilizing | 0.272 | N | 0.649 | neutral | None | None | None | None | I |
Q/H | 0.7678 | likely_pathogenic | 0.7346 | pathogenic | -0.792 | Destabilizing | 0.667 | D | 0.563 | neutral | N | 0.497316883 | None | None | I |
Q/I | 0.689 | likely_pathogenic | 0.6509 | pathogenic | 0.585 | Stabilizing | 0.726 | D | 0.783 | deleterious | None | None | None | None | I |
Q/K | 0.2547 | likely_benign | 0.2333 | benign | -0.286 | Destabilizing | 0.055 | N | 0.523 | neutral | N | 0.467340692 | None | None | I |
Q/L | 0.5315 | ambiguous | 0.4627 | ambiguous | 0.585 | Stabilizing | 0.22 | N | 0.664 | neutral | N | 0.489676047 | None | None | I |
Q/M | 0.5971 | likely_pathogenic | 0.5439 | ambiguous | 0.704 | Stabilizing | 0.89 | D | 0.566 | neutral | None | None | None | None | I |
Q/N | 0.8442 | likely_pathogenic | 0.8215 | pathogenic | -1.183 | Destabilizing | 0.272 | N | 0.528 | neutral | None | None | None | None | I |
Q/P | 0.9751 | likely_pathogenic | 0.9692 | pathogenic | 0.328 | Stabilizing | 0.667 | D | 0.698 | prob.neutral | N | 0.486043226 | None | None | I |
Q/R | 0.2603 | likely_benign | 0.2395 | benign | -0.384 | Destabilizing | 0.124 | N | 0.499 | neutral | N | 0.469186132 | None | None | I |
Q/S | 0.693 | likely_pathogenic | 0.6427 | pathogenic | -1.117 | Destabilizing | 0.157 | N | 0.5 | neutral | None | None | None | None | I |
Q/T | 0.588 | likely_pathogenic | 0.5328 | ambiguous | -0.782 | Destabilizing | 0.272 | N | 0.634 | neutral | None | None | None | None | I |
Q/V | 0.4035 | ambiguous | 0.3629 | ambiguous | 0.328 | Stabilizing | 0.567 | D | 0.695 | prob.neutral | None | None | None | None | I |
Q/W | 0.9244 | likely_pathogenic | 0.9109 | pathogenic | -0.597 | Destabilizing | 0.968 | D | 0.73 | prob.delet. | None | None | None | None | I |
Q/Y | 0.9117 | likely_pathogenic | 0.8848 | pathogenic | -0.052 | Destabilizing | 0.89 | D | 0.721 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.