Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18865 | 56818;56819;56820 | chr2:178599200;178599199;178599198 | chr2:179463927;179463926;179463925 |
N2AB | 17224 | 51895;51896;51897 | chr2:178599200;178599199;178599198 | chr2:179463927;179463926;179463925 |
N2A | 16297 | 49114;49115;49116 | chr2:178599200;178599199;178599198 | chr2:179463927;179463926;179463925 |
N2B | 9800 | 29623;29624;29625 | chr2:178599200;178599199;178599198 | chr2:179463927;179463926;179463925 |
Novex-1 | 9925 | 29998;29999;30000 | chr2:178599200;178599199;178599198 | chr2:179463927;179463926;179463925 |
Novex-2 | 9992 | 30199;30200;30201 | chr2:178599200;178599199;178599198 | chr2:179463927;179463926;179463925 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 0.976 | N | 0.715 | 0.318 | 0.411665641125 | gnomAD-4.0.0 | 6.59717E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.41779E-06 | 0 | 0 |
Y/F | None | None | 0.002 | N | 0.32 | 0.067 | 0.269111216191 | gnomAD-4.0.0 | 7.33019E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.99593E-05 | 0 | 0 | 0 | 0 |
Y/H | rs749192204 | 0.421 | 0.781 | N | 0.591 | 0.38 | 0.326881540566 | gnomAD-2.1.1 | 5.68E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 6.78E-05 | None | 0 | 0 | 0 |
Y/H | rs749192204 | 0.421 | 0.781 | N | 0.591 | 0.38 | 0.326881540566 | gnomAD-4.0.0 | 5.86489E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.21569E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9296 | likely_pathogenic | 0.8871 | pathogenic | -0.715 | Destabilizing | 0.399 | N | 0.605 | neutral | None | None | None | None | I |
Y/C | 0.5452 | ambiguous | 0.451 | ambiguous | 0.083 | Stabilizing | 0.976 | D | 0.715 | prob.delet. | N | 0.506763085 | None | None | I |
Y/D | 0.8992 | likely_pathogenic | 0.8613 | pathogenic | 0.851 | Stabilizing | 0.916 | D | 0.681 | prob.neutral | N | 0.481329057 | None | None | I |
Y/E | 0.969 | likely_pathogenic | 0.9516 | pathogenic | 0.834 | Stabilizing | 0.826 | D | 0.677 | prob.neutral | None | None | None | None | I |
Y/F | 0.1134 | likely_benign | 0.1122 | benign | -0.366 | Destabilizing | 0.002 | N | 0.32 | neutral | N | 0.478576406 | None | None | I |
Y/G | 0.9263 | likely_pathogenic | 0.8876 | pathogenic | -0.906 | Destabilizing | 0.826 | D | 0.661 | neutral | None | None | None | None | I |
Y/H | 0.5854 | likely_pathogenic | 0.5038 | ambiguous | 0.189 | Stabilizing | 0.781 | D | 0.591 | neutral | N | 0.508051164 | None | None | I |
Y/I | 0.773 | likely_pathogenic | 0.7073 | pathogenic | -0.231 | Destabilizing | 0.539 | D | 0.602 | neutral | None | None | None | None | I |
Y/K | 0.9522 | likely_pathogenic | 0.9216 | pathogenic | 0.167 | Stabilizing | 0.826 | D | 0.673 | neutral | None | None | None | None | I |
Y/L | 0.7988 | likely_pathogenic | 0.7494 | pathogenic | -0.231 | Destabilizing | 0.25 | N | 0.622 | neutral | None | None | None | None | I |
Y/M | 0.8513 | likely_pathogenic | 0.7928 | pathogenic | -0.105 | Destabilizing | 0.947 | D | 0.616 | neutral | None | None | None | None | I |
Y/N | 0.6852 | likely_pathogenic | 0.6123 | pathogenic | -0.024 | Destabilizing | 0.916 | D | 0.683 | prob.neutral | N | 0.515977214 | None | None | I |
Y/P | 0.9941 | likely_pathogenic | 0.9902 | pathogenic | -0.373 | Destabilizing | 0.935 | D | 0.695 | prob.neutral | None | None | None | None | I |
Y/Q | 0.9351 | likely_pathogenic | 0.8973 | pathogenic | 0.021 | Stabilizing | 0.935 | D | 0.633 | neutral | None | None | None | None | I |
Y/R | 0.905 | likely_pathogenic | 0.8549 | pathogenic | 0.43 | Stabilizing | 0.826 | D | 0.684 | prob.neutral | None | None | None | None | I |
Y/S | 0.8522 | likely_pathogenic | 0.7898 | pathogenic | -0.457 | Destabilizing | 0.781 | D | 0.657 | neutral | N | 0.516497289 | None | None | I |
Y/T | 0.9294 | likely_pathogenic | 0.8909 | pathogenic | -0.38 | Destabilizing | 0.826 | D | 0.662 | neutral | None | None | None | None | I |
Y/V | 0.6955 | likely_pathogenic | 0.615 | pathogenic | -0.373 | Destabilizing | 0.25 | N | 0.64 | neutral | None | None | None | None | I |
Y/W | 0.5784 | likely_pathogenic | 0.5316 | ambiguous | -0.474 | Destabilizing | 0.947 | D | 0.585 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.