Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18869 | 56830;56831;56832 | chr2:178599188;178599187;178599186 | chr2:179463915;179463914;179463913 |
N2AB | 17228 | 51907;51908;51909 | chr2:178599188;178599187;178599186 | chr2:179463915;179463914;179463913 |
N2A | 16301 | 49126;49127;49128 | chr2:178599188;178599187;178599186 | chr2:179463915;179463914;179463913 |
N2B | 9804 | 29635;29636;29637 | chr2:178599188;178599187;178599186 | chr2:179463915;179463914;179463913 |
Novex-1 | 9929 | 30010;30011;30012 | chr2:178599188;178599187;178599186 | chr2:179463915;179463914;179463913 |
Novex-2 | 9996 | 30211;30212;30213 | chr2:178599188;178599187;178599186 | chr2:179463915;179463914;179463913 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.891 | N | 0.473 | 0.193 | 0.343101102393 | gnomAD-4.0.0 | 3.68E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.75148E-06 | 1.53619E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1698 | likely_benign | 0.1516 | benign | -0.481 | Destabilizing | 0.625 | D | 0.497 | neutral | N | 0.517884156 | None | None | N |
E/C | 0.8149 | likely_pathogenic | 0.7699 | pathogenic | -0.211 | Destabilizing | 0.998 | D | 0.6 | neutral | None | None | None | None | N |
E/D | 0.0881 | likely_benign | 0.0907 | benign | -0.503 | Destabilizing | 0.012 | N | 0.094 | neutral | N | 0.465783254 | None | None | N |
E/F | 0.6966 | likely_pathogenic | 0.6263 | pathogenic | -0.274 | Destabilizing | 0.949 | D | 0.591 | neutral | None | None | None | None | N |
E/G | 0.2299 | likely_benign | 0.1958 | benign | -0.697 | Destabilizing | 0.891 | D | 0.585 | neutral | N | 0.484522289 | None | None | N |
E/H | 0.5091 | ambiguous | 0.4371 | ambiguous | -0.052 | Destabilizing | 0.991 | D | 0.549 | neutral | None | None | None | None | N |
E/I | 0.2944 | likely_benign | 0.2515 | benign | 0.062 | Stabilizing | 0.904 | D | 0.611 | neutral | None | None | None | None | N |
E/K | 0.1719 | likely_benign | 0.1375 | benign | 0.129 | Stabilizing | 0.891 | D | 0.473 | neutral | N | 0.496778165 | None | None | N |
E/L | 0.3193 | likely_benign | 0.284 | benign | 0.062 | Stabilizing | 0.016 | N | 0.434 | neutral | None | None | None | None | N |
E/M | 0.4009 | ambiguous | 0.3579 | ambiguous | 0.13 | Stabilizing | 0.949 | D | 0.582 | neutral | None | None | None | None | N |
E/N | 0.2371 | likely_benign | 0.2193 | benign | -0.219 | Destabilizing | 0.842 | D | 0.564 | neutral | None | None | None | None | N |
E/P | 0.3485 | ambiguous | 0.2969 | benign | -0.099 | Destabilizing | 0.007 | N | 0.18 | neutral | None | None | None | None | N |
E/Q | 0.1575 | likely_benign | 0.1391 | benign | -0.184 | Destabilizing | 0.891 | D | 0.577 | neutral | N | 0.491390988 | None | None | N |
E/R | 0.3189 | likely_benign | 0.2541 | benign | 0.404 | Stabilizing | 0.974 | D | 0.58 | neutral | None | None | None | None | N |
E/S | 0.2234 | likely_benign | 0.1994 | benign | -0.389 | Destabilizing | 0.842 | D | 0.448 | neutral | None | None | None | None | N |
E/T | 0.2592 | likely_benign | 0.2254 | benign | -0.214 | Destabilizing | 0.915 | D | 0.548 | neutral | None | None | None | None | N |
E/V | 0.1866 | likely_benign | 0.1614 | benign | -0.099 | Destabilizing | 0.669 | D | 0.584 | neutral | N | 0.470914712 | None | None | N |
E/W | 0.8899 | likely_pathogenic | 0.8429 | pathogenic | -0.089 | Destabilizing | 0.998 | D | 0.663 | neutral | None | None | None | None | N |
E/Y | 0.5588 | ambiguous | 0.4841 | ambiguous | -0.028 | Destabilizing | 0.991 | D | 0.58 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.