Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18874 | 56845;56846;56847 | chr2:178599173;178599172;178599171 | chr2:179463900;179463899;179463898 |
N2AB | 17233 | 51922;51923;51924 | chr2:178599173;178599172;178599171 | chr2:179463900;179463899;179463898 |
N2A | 16306 | 49141;49142;49143 | chr2:178599173;178599172;178599171 | chr2:179463900;179463899;179463898 |
N2B | 9809 | 29650;29651;29652 | chr2:178599173;178599172;178599171 | chr2:179463900;179463899;179463898 |
Novex-1 | 9934 | 30025;30026;30027 | chr2:178599173;178599172;178599171 | chr2:179463900;179463899;179463898 |
Novex-2 | 10001 | 30226;30227;30228 | chr2:178599173;178599172;178599171 | chr2:179463900;179463899;179463898 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.007 | N | 0.347 | 0.05 | 0.198526703765 | gnomAD-4.0.0 | 1.47445E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.87813E-06 | 0 | 0 |
E/K | rs781465190 | -0.156 | 0.518 | N | 0.441 | 0.12 | 0.260735089382 | gnomAD-2.1.1 | 5.87E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.18E-05 | 0 |
E/K | rs781465190 | -0.156 | 0.518 | N | 0.441 | 0.12 | 0.260735089382 | gnomAD-4.0.0 | 7.38197E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.39894E-07 | 0 | 0 |
E/Q | None | None | 0.062 | N | 0.295 | 0.098 | 0.237489013734 | gnomAD-4.0.0 | 7.38197E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.39894E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1273 | likely_benign | 0.1229 | benign | -0.157 | Destabilizing | 0.518 | D | 0.513 | neutral | N | 0.506933657 | None | None | N |
E/C | 0.7355 | likely_pathogenic | 0.7277 | pathogenic | -0.216 | Destabilizing | 0.996 | D | 0.663 | prob.neutral | None | None | None | None | N |
E/D | 0.1084 | likely_benign | 0.1028 | benign | -0.288 | Destabilizing | 0.007 | N | 0.347 | neutral | N | 0.451619091 | None | None | N |
E/F | 0.625 | likely_pathogenic | 0.6187 | pathogenic | -0.006 | Destabilizing | 0.996 | D | 0.733 | deleterious | None | None | None | None | N |
E/G | 0.1572 | likely_benign | 0.1456 | benign | -0.319 | Destabilizing | 0.682 | D | 0.659 | prob.neutral | N | 0.485154172 | None | None | N |
E/H | 0.3969 | ambiguous | 0.3982 | ambiguous | 0.544 | Stabilizing | 0.974 | D | 0.616 | neutral | None | None | None | None | N |
E/I | 0.2244 | likely_benign | 0.2151 | benign | 0.225 | Stabilizing | 0.953 | D | 0.78 | deleterious | None | None | None | None | N |
E/K | 0.1037 | likely_benign | 0.1012 | benign | 0.427 | Stabilizing | 0.518 | D | 0.441 | neutral | N | 0.507800448 | None | None | N |
E/L | 0.2488 | likely_benign | 0.242 | benign | 0.225 | Stabilizing | 0.909 | D | 0.755 | deleterious | None | None | None | None | N |
E/M | 0.3157 | likely_benign | 0.3082 | benign | 0.043 | Stabilizing | 0.987 | D | 0.694 | prob.delet. | None | None | None | None | N |
E/N | 0.2059 | likely_benign | 0.1995 | benign | 0.012 | Stabilizing | 0.909 | D | 0.629 | neutral | None | None | None | None | N |
E/P | 0.2941 | likely_benign | 0.289 | benign | 0.117 | Stabilizing | 0.953 | D | 0.665 | prob.neutral | None | None | None | None | N |
E/Q | 0.1183 | likely_benign | 0.1196 | benign | 0.058 | Stabilizing | 0.062 | N | 0.295 | neutral | N | 0.501951911 | None | None | N |
E/R | 0.2145 | likely_benign | 0.2175 | benign | 0.721 | Stabilizing | 0.833 | D | 0.595 | neutral | None | None | None | None | N |
E/S | 0.1661 | likely_benign | 0.1637 | benign | -0.114 | Destabilizing | 0.587 | D | 0.514 | neutral | None | None | None | None | N |
E/T | 0.1862 | likely_benign | 0.1797 | benign | 0.031 | Stabilizing | 0.909 | D | 0.683 | prob.neutral | None | None | None | None | N |
E/V | 0.1486 | likely_benign | 0.1402 | benign | 0.117 | Stabilizing | 0.883 | D | 0.735 | deleterious | N | 0.476253402 | None | None | N |
E/W | 0.8546 | likely_pathogenic | 0.8531 | pathogenic | 0.121 | Stabilizing | 0.996 | D | 0.65 | prob.neutral | None | None | None | None | N |
E/Y | 0.5123 | ambiguous | 0.5089 | ambiguous | 0.238 | Stabilizing | 0.953 | D | 0.741 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.