Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18880 | 56863;56864;56865 | chr2:178599155;178599154;178599153 | chr2:179463882;179463881;179463880 |
N2AB | 17239 | 51940;51941;51942 | chr2:178599155;178599154;178599153 | chr2:179463882;179463881;179463880 |
N2A | 16312 | 49159;49160;49161 | chr2:178599155;178599154;178599153 | chr2:179463882;179463881;179463880 |
N2B | 9815 | 29668;29669;29670 | chr2:178599155;178599154;178599153 | chr2:179463882;179463881;179463880 |
Novex-1 | 9940 | 30043;30044;30045 | chr2:178599155;178599154;178599153 | chr2:179463882;179463881;179463880 |
Novex-2 | 10007 | 30244;30245;30246 | chr2:178599155;178599154;178599153 | chr2:179463882;179463881;179463880 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs200544272 | 0.551 | 0.999 | N | 0.765 | 0.252 | 0.197625483188 | gnomAD-2.1.1 | 6.96E-05 | None | None | None | None | N | None | 6.13282E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
N/K | rs200544272 | 0.551 | 0.999 | N | 0.765 | 0.252 | 0.197625483188 | gnomAD-3.1.2 | 1.05277E-04 | None | None | None | None | N | None | 3.86529E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
N/K | rs200544272 | 0.551 | 0.999 | N | 0.765 | 0.252 | 0.197625483188 | gnomAD-4.0.0 | 1.72725E-05 | None | None | None | None | N | None | 3.23388E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 8.84305E-07 | 1.4334E-05 | 1.73166E-05 |
N/S | rs1391726501 | 0.334 | 0.997 | N | 0.629 | 0.262 | 0.251116650651 | gnomAD-2.1.1 | 5.95E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.91E-05 | 1.10256E-04 | 0 |
N/S | rs1391726501 | 0.334 | 0.997 | N | 0.629 | 0.262 | 0.251116650651 | gnomAD-3.1.2 | 6.58E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 9.42E-05 | 0 | 1.32407E-04 | 0 | 0 |
N/S | rs1391726501 | 0.334 | 0.997 | N | 0.629 | 0.262 | 0.251116650651 | gnomAD-4.0.0 | 2.22597E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 8.32002E-05 | 0 | 2.43424E-05 | 1.86386E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.7147 | likely_pathogenic | 0.7447 | pathogenic | -0.245 | Destabilizing | 0.999 | D | 0.625 | neutral | None | None | None | None | N |
N/C | 0.6413 | likely_pathogenic | 0.6666 | pathogenic | 0.342 | Stabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
N/D | 0.2312 | likely_benign | 0.2644 | benign | 0.148 | Stabilizing | 0.997 | D | 0.703 | prob.delet. | N | 0.460390503 | None | None | N |
N/E | 0.8596 | likely_pathogenic | 0.8674 | pathogenic | 0.102 | Stabilizing | 0.998 | D | 0.758 | deleterious | None | None | None | None | N |
N/F | 0.8059 | likely_pathogenic | 0.8451 | pathogenic | -0.687 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
N/G | 0.7369 | likely_pathogenic | 0.7423 | pathogenic | -0.395 | Destabilizing | 0.998 | D | 0.616 | neutral | None | None | None | None | N |
N/H | 0.246 | likely_benign | 0.2637 | benign | -0.442 | Destabilizing | 0.999 | D | 0.82 | deleterious | N | 0.501237048 | None | None | N |
N/I | 0.6152 | likely_pathogenic | 0.6538 | pathogenic | 0.055 | Stabilizing | 0.999 | D | 0.768 | deleterious | N | 0.467740571 | None | None | N |
N/K | 0.8481 | likely_pathogenic | 0.8665 | pathogenic | 0.152 | Stabilizing | 0.999 | D | 0.765 | deleterious | N | 0.519649451 | None | None | N |
N/L | 0.5402 | ambiguous | 0.5822 | pathogenic | 0.055 | Stabilizing | 0.999 | D | 0.727 | deleterious | None | None | None | None | N |
N/M | 0.6941 | likely_pathogenic | 0.7334 | pathogenic | 0.337 | Stabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
N/P | 0.7968 | likely_pathogenic | 0.8103 | pathogenic | -0.019 | Destabilizing | 0.999 | D | 0.76 | deleterious | None | None | None | None | N |
N/Q | 0.8091 | likely_pathogenic | 0.8272 | pathogenic | -0.279 | Destabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | N |
N/R | 0.8622 | likely_pathogenic | 0.877 | pathogenic | 0.205 | Stabilizing | 0.999 | D | 0.805 | deleterious | None | None | None | None | N |
N/S | 0.1932 | likely_benign | 0.2067 | benign | -0.042 | Destabilizing | 0.997 | D | 0.629 | neutral | N | 0.463892168 | None | None | N |
N/T | 0.4902 | ambiguous | 0.4957 | ambiguous | 0.047 | Stabilizing | 0.997 | D | 0.755 | deleterious | N | 0.446407194 | None | None | N |
N/V | 0.6527 | likely_pathogenic | 0.6811 | pathogenic | -0.019 | Destabilizing | 0.999 | D | 0.719 | prob.delet. | None | None | None | None | N |
N/W | 0.9271 | likely_pathogenic | 0.94 | pathogenic | -0.711 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
N/Y | 0.3459 | ambiguous | 0.3787 | ambiguous | -0.426 | Destabilizing | 1.0 | D | 0.787 | deleterious | N | 0.501237048 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.