Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18884 | 56875;56876;56877 | chr2:178599060;178599059;178599058 | chr2:179463787;179463786;179463785 |
N2AB | 17243 | 51952;51953;51954 | chr2:178599060;178599059;178599058 | chr2:179463787;179463786;179463785 |
N2A | 16316 | 49171;49172;49173 | chr2:178599060;178599059;178599058 | chr2:179463787;179463786;179463785 |
N2B | 9819 | 29680;29681;29682 | chr2:178599060;178599059;178599058 | chr2:179463787;179463786;179463785 |
Novex-1 | 9944 | 30055;30056;30057 | chr2:178599060;178599059;178599058 | chr2:179463787;179463786;179463785 |
Novex-2 | 10011 | 30256;30257;30258 | chr2:178599060;178599059;178599058 | chr2:179463787;179463786;179463785 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.994 | N | 0.531 | 0.274 | 0.591436515814 | gnomAD-4.0.0 | 7.20496E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.2585E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2498 | likely_benign | 0.3113 | benign | -0.525 | Destabilizing | 0.997 | D | 0.457 | neutral | N | 0.492425564 | None | None | I |
V/C | 0.8238 | likely_pathogenic | 0.82 | pathogenic | -0.638 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | I |
V/D | 0.7057 | likely_pathogenic | 0.7805 | pathogenic | -0.271 | Destabilizing | 0.999 | D | 0.819 | deleterious | N | 0.494459789 | None | None | I |
V/E | 0.4187 | ambiguous | 0.5025 | ambiguous | -0.399 | Destabilizing | 0.999 | D | 0.816 | deleterious | None | None | None | None | I |
V/F | 0.3781 | ambiguous | 0.4489 | ambiguous | -0.84 | Destabilizing | 0.999 | D | 0.667 | prob.neutral | N | 0.476355534 | None | None | I |
V/G | 0.4901 | ambiguous | 0.574 | pathogenic | -0.634 | Destabilizing | 0.999 | D | 0.758 | deleterious | N | 0.487876424 | None | None | I |
V/H | 0.7758 | likely_pathogenic | 0.8151 | pathogenic | -0.179 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
V/I | 0.0807 | likely_benign | 0.0844 | benign | -0.396 | Destabilizing | 0.994 | D | 0.531 | neutral | N | 0.518209443 | None | None | I |
V/K | 0.4332 | ambiguous | 0.4755 | ambiguous | -0.307 | Destabilizing | 0.999 | D | 0.815 | deleterious | None | None | None | None | I |
V/L | 0.2588 | likely_benign | 0.303 | benign | -0.396 | Destabilizing | 0.994 | D | 0.521 | neutral | N | 0.465213038 | None | None | I |
V/M | 0.2056 | likely_benign | 0.2586 | benign | -0.297 | Destabilizing | 0.999 | D | 0.699 | prob.delet. | None | None | None | None | I |
V/N | 0.549 | ambiguous | 0.6139 | pathogenic | -0.087 | Destabilizing | 0.999 | D | 0.835 | deleterious | None | None | None | None | I |
V/P | 0.3051 | likely_benign | 0.3068 | benign | -0.405 | Destabilizing | 0.999 | D | 0.823 | deleterious | None | None | None | None | I |
V/Q | 0.4232 | ambiguous | 0.4763 | ambiguous | -0.386 | Destabilizing | 0.999 | D | 0.842 | deleterious | None | None | None | None | I |
V/R | 0.4425 | ambiguous | 0.4846 | ambiguous | 0.236 | Stabilizing | 0.999 | D | 0.836 | deleterious | None | None | None | None | I |
V/S | 0.4069 | ambiguous | 0.4806 | ambiguous | -0.462 | Destabilizing | 0.999 | D | 0.821 | deleterious | None | None | None | None | I |
V/T | 0.2307 | likely_benign | 0.2747 | benign | -0.493 | Destabilizing | 0.998 | D | 0.711 | prob.delet. | None | None | None | None | I |
V/W | 0.946 | likely_pathogenic | 0.9588 | pathogenic | -0.869 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | I |
V/Y | 0.7933 | likely_pathogenic | 0.8189 | pathogenic | -0.56 | Destabilizing | 0.999 | D | 0.712 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.